Gene Ddes_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0474 
Symbol 
ID7284139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp582409 
End bp583419 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content59% 
IMG OID643581265 
Productinner-membrane translocator 
Protein accessionYP_002479064 
Protein GI220903752 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACAG AGCCTCTTCG TATCGCCGCC AGGGTTGCTC TGGCGGCGGT CATCTGTGTG 
CTGCCCCTGA TCAGCAATGC CTACTGGACA GACGTGTGCG TGAGCATTGG CCTGTACGCG
CTGCTTTCGC TTTCATTGAA CGTGATTCTG GGCCAGGCGG GTATTTTTCA TATGGGGCAC
GCGGCTTTTT TTGCCGTGGG CGCATATACC ACCGCCATAC TCAACACCCT GTGCCAGTGG
CCCATATTCT GGACCATGCC CGTGGCCGGA GCCGTGGCCG CCGTATTTGC CCTGCTGGTG
GCGCGCCCCA TCATTCACCT GCGCGGCGAC TATCTGCTTA TCGTGACCAT AGGCATTGTG
GAAATTGTGC GCATTGCGCT CATCAACGAT GTTTTCGGCC TTACCGGAGG GGCCAACGGC
ATTTTCGGCA TCAGCCGCCC CAGGTTTTTC GGCTTCAGGA TAGTAAAGGG CATACAGTTT
TACTATCTGG TCTGGGGCAT GGTGGCCGTG AGCCTGCTGC TTTTTTACGG CCTTTGGCAT
TCGCGTTTTG GCCGCGCCCT CAACTACATC AAGGAAGATG ACGTGGCCGC CGAGGGCTGC
GGCATCAACG TCACCCACTA CAAGCTCATG GCTTTTGTGC TCGGAGCGTT CTGGGCGGGT
ATGGCGGGAA CCCTGTATGC GGCCAAAATG ACGACCATTT CACCGGAATC GTTCAGCTTT
ATGGAATCCG TCATTATTTT TGCCGTGGTC ATCCTTTCGG GCGGCAGCCA GATAGGCGTG
CTTATCAGCG CCTTTCTGTT CATCGGCCTG CCGGAACTGC TGCGGGAGTT TTCCAACGCG
CGCATGCTTA TTTTTGGTCT GGCCATGATG GTCATGATGG TCTGGCGGCC CCAGGGGCTT
CTGCCCCCGC GCCGCCGCCG TTACCACGTG GATGCCCTTT CCGGAGAAAA CGTCCCGCAG
GATGCCCCGG GTGAGGGGGA TAGCGGGACT GCCAGCGGGA GGCCCGCATG A
 
Protein sequence
MRTEPLRIAA RVALAAVICV LPLISNAYWT DVCVSIGLYA LLSLSLNVIL GQAGIFHMGH 
AAFFAVGAYT TAILNTLCQW PIFWTMPVAG AVAAVFALLV ARPIIHLRGD YLLIVTIGIV
EIVRIALIND VFGLTGGANG IFGISRPRFF GFRIVKGIQF YYLVWGMVAV SLLLFYGLWH
SRFGRALNYI KEDDVAAEGC GINVTHYKLM AFVLGAFWAG MAGTLYAAKM TTISPESFSF
MESVIIFAVV ILSGGSQIGV LISAFLFIGL PELLREFSNA RMLIFGLAMM VMMVWRPQGL
LPPRRRRYHV DALSGENVPQ DAPGEGDSGT ASGRPA