Gene Ddes_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0469 
Symbol 
ID7284134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp574470 
End bp575933 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content60% 
IMG OID643581260 
ProductAlpha-amylase 
Protein accessionYP_002479059 
Protein GI220903747 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1449] Alpha-amylase/alpha-mannosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.763959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCCC TCTGCTTCTG CTATGAGGTT CACGAACCTT ACCAGCTGCG CCGCTATACC 
GTCTTTGACA TGGGTCAGAA CTCCATCTAC GAGGAAGACG ACCATAACTG CGAAGCCCTC 
CTGCGTGCGG CCCGCCTGTG CTATCTGCCC GCCAACGAGC TTATGCTCAG GCTCATCCGC 
CGCTACGACG GCGCCTTTCG CCTGTCCTTT TCCATTTCCG GTGTCGCCCT TGACCTTTTC 
GAGCAATACA CCCCCGAGGT GCTGGAAAGC TTCACGGCGC TGGCCCGCAC GGGCTGCGTG 
GAGTTTGTGG CCGAAACCGC GCCGCACTCA CTGGCCTTTC TCTACTCCAG ACAGGACTTT 
GACCGGCAGG TGCGGGAACA GTCCGCCCGT CTTGAACATC TTTTCGGCGT AAAGCCGGTG 
ACGTTCAAAA ATACCGAGTG CGTTTACAAT AACGATCTGG CCGCCGCCGT GGCGGGACAC 
GGCTTCAGGG CTGTGCTGGC CGAAGGAGCC GACCATGTGC TCGGCTGGCG CAGCGCCAAC 
TATCTTTACC GCCCGGCGAG CGCTCCGGGG CTTGCACTGC TGTTGCGCAA CGCGGGGCTT 
TCCGGCGATG TGGGCCTGCG TTTTTCAGAC CACAGTTGGC CTGCATGGCC TCTCAGGGCC 
GAAACATTCG CCGCATGGTG CCACGGCCTT GAAGGGTCGG CGGACATCAT AAATATCTTC 
AATGATTATC ATGTGTTCGG ACTTCGTCAC GATAAAGAAT CGGGCATTTT CGATTTTATG 
GAGGCCCTGC CCGGTGCTCT GCTGGCCCAC GAAGAATTCA GCTTTACCAC CCCGGCTCTG 
GCCGCAGAAA ATCTCAGGCC CGTGGGCGAG GTGGACGTGC CGCAGTTCAT GTCCTGGGAA 
GATGAAGGGC GCGACCTCAC AGCATGGCTC GGCAACGACA TGCAGAAGGA CGCCATACAC 
GCGCTCTACG CCATGGGCCC CCGAACAGCC GCTTGCAACA GCGCACTCAG GCGCGACTTT 
GACCGCCTTC AGACCGCCGA CCACTTTCGG CATATGTCGA CCAAATGGTT TTCCAACGAG 
GCCCCCGACA GGCCCAGCCC CTTTGCCAGC CCGTATGATG CCTACATCAC CTATATGAAT 
GTGCTCGCCG ATTTTGAGCT GCGCCTCAAG GCAGACGAAA GCGCACGGGC AACGGCAACC 
GCTGCGGGCA AGCCCGCGGA CGCAGCCCCT GTGGCAAAGG CCAGAGGCAG GGTCGGCGCA 
AACGCGGCCC GAAATAACGG TACAAAGTCC GCCGTCAAGA ACGCAGGCTC CCCCGCGCCC 
CGGCGCGGCG GAAAATCCCC TGCCGAAATA CAGGACGCAA ACTCGGCAGA CACGCGGGCA 
GCAGGCAGTA AAAAAACCGG AACCACCCGT GCAAACCAAG AAAAAAAGCC CGCCACGCTG 
CGCAAAAGCC GCAAAAATGC ATGA
 
Protein sequence
MPALCFCYEV HEPYQLRRYT VFDMGQNSIY EEDDHNCEAL LRAARLCYLP ANELMLRLIR 
RYDGAFRLSF SISGVALDLF EQYTPEVLES FTALARTGCV EFVAETAPHS LAFLYSRQDF 
DRQVREQSAR LEHLFGVKPV TFKNTECVYN NDLAAAVAGH GFRAVLAEGA DHVLGWRSAN 
YLYRPASAPG LALLLRNAGL SGDVGLRFSD HSWPAWPLRA ETFAAWCHGL EGSADIINIF 
NDYHVFGLRH DKESGIFDFM EALPGALLAH EEFSFTTPAL AAENLRPVGE VDVPQFMSWE 
DEGRDLTAWL GNDMQKDAIH ALYAMGPRTA ACNSALRRDF DRLQTADHFR HMSTKWFSNE 
APDRPSPFAS PYDAYITYMN VLADFELRLK ADESARATAT AAGKPADAAP VAKARGRVGA 
NAARNNGTKS AVKNAGSPAP RRGGKSPAEI QDANSADTRA AGSKKTGTTR ANQEKKPATL 
RKSRKNA