| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0429 |
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| Symbol | |
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| ID | 7284093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 520396 |
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| End bp | 522459 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643581219 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002479019 |
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| Protein GI | 220903707 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.395875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAACC TTTCCCTGAG CCTCGCAGCC CTCGGGCTGT GCCTGAGCGT CACGACGGCA
ACAGCAAAAC AAGGCCCCGC GGCCCCGGAC TACACGCTGG ACGCCATAAC GGTTACCGCC
ACCAAGCGTG AGCAGAAAAT CAAGGATATT GCCACAAGCA TATCCACCGC CACTGATCTT
GACCTGGAAA ATGCCGCTGC CCACACCCTG AAGGACGCCA CCCGGCTTTT CCCCAACGTG
CACATGAAAA GCACCAGTTC GGGTAATGAA ATTGTCATCC GTGGGTTTTC CACCTGGGAT
ACGGCCCTGC AATCACCGGC CGGACTGTAT GTGGACGAGA TCCCCTACCC CATTTCCTAC
ATGCAGAACC TCTACCTGCT GGATATTGAC AAAGTAGAGG TCCTGCGCGG CCCGCAGGGA
ACTCTTTTCG GCCAGAACAG CGAATCCGGC GTGGTCAACC TGACGCGCCG CGTGCCGGAC
GACCAGGTAC GGGCGCACAT TTTTACCGAT GCCGGCACCT ACAATACCTA CCGTCTGGGG
GCTGCCGCCT CCGCGCCCCT TCTTGAAGAC AGGGCTTATT TTTCCGGCAG TTTCTTACGC
CATCAAAGCG ATGGCTATGT GGACAACCTG TATAAAGACA GCACCCGCGC CGCGCGGCAC
GAATCCACCT CCGGCAGGGG CATGCTGCGT CTGACGCCAA CAGACAGGCT GGACCTGCGT
TTCTCGCTGG ATGCCTCACG CCAGGAAGAT GGCGTGGGAA CCATGCGCCT CGACACCGGT
CCCTACCGTT CCAACAGGTG GGAAGTGCGC TCAGATGCCG CGGATTCGTC TTCCGCAAAC
TTTACCTTGC CTGCACTGAT TGCCAGTTAT ATGGGTGATG CTGTCAAACT TACGTCCATT
TCCAGCTATA CGGCATACAA CTACGAGATG AAGAGCGACA TTGACAGAAC CCCGCTGCCT
ACCGGTGTTT CAGACATGCA GATCAATCAG CGCGGTTTTA CGCAAGAGTT GCGTCTGGCT
TCTGTGGGCA AATCACGTCT CTCATGGGTG ACCGGAACAT ACCTCGGCTC GTCAAGAACA
GAAACAGACA TGAATCGCCT CATGCAGCGC GCCGTGGCCC GGTCCTACCT TCATACGGAC
TATATCAGCG ACACGGGAGC GCTCTTCGGC CAGAGCACGT GGTCCATCGT TGAAGGTCTG
CGCCTGACCC TGGGCCTGCG CGCCGAACAT ACGCGGCTGA ACGGCGAACA GACTTACCGC
ACCATGGCCT CGCGGCGGCA CTACACCAAG GATGTCTCCT ACACGGAACT GCTGCCCATG
GCCTCGCTTT CGTGGGACGC CACAGACAAT ATCACCCCGT ACATTTCCTG GTCACAGGGC
TATCTGCCCG GCGGGTTCAA CGTCTTTTCA GCCAACAACC GCAGCAATTT TTATTATGAG
CCGGAGTACA GCACCAACTA TGAGCTGGGG CTGAAAACCC ACTGGCTGGA CGACCGGCTT
ACGGCCAATG TTACTGCTTT TTATTCCTCC ATCCGCGACA AGCAGGTGCG GGAAGAAGAC
CCCTCCGGCG GTGTGGGTAC ATGGAAGTTC ACCAACTCCG CCCAGGCCCA CTCCTCGGGG
CTGGAAGCGG AAATAAAGGC CTATCCGCTG CCCGGCCTGG AGCTGCGGGG AGGCGTGGGC
TACGCCCGCT CGATAGTGGA CGACTGGACC ACCACGGTTA ACGGCGTTAA AAGGGACTTC
AGCGGCAAAC GCCTGCCCTG GGCTCCGGAG CTGACCTATA ATGTGGGCGT GGGCTATACA
CATGAAACCG GGCTGTTCGC CCAGGTGGAC CTCTTCGGCG CCGGAAAACA GTATTTTGAC
GCAGAAAACA CTCTCAGCGA CCCGGGCTAC CAGACCATAA ACGCCCAGAT CGGCTACCAC
GGCGACAACT GGGATGTTTC CGTGTGGGGC AAGAACGTTC TGGACGCCCG CTATGCCACC
AAAAAACTGG CTGCCGCAGG CCAGACCATT GTGGAAGACG GCGCGCCCAT GACGTTTGGC
GTCAGCGTGG GCTGGAGGTT CTAG
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| Protein sequence | MRNLSLSLAA LGLCLSVTTA TAKQGPAAPD YTLDAITVTA TKREQKIKDI ATSISTATDL
DLENAAAHTL KDATRLFPNV HMKSTSSGNE IVIRGFSTWD TALQSPAGLY VDEIPYPISY
MQNLYLLDID KVEVLRGPQG TLFGQNSESG VVNLTRRVPD DQVRAHIFTD AGTYNTYRLG
AAASAPLLED RAYFSGSFLR HQSDGYVDNL YKDSTRAARH ESTSGRGMLR LTPTDRLDLR
FSLDASRQED GVGTMRLDTG PYRSNRWEVR SDAADSSSAN FTLPALIASY MGDAVKLTSI
SSYTAYNYEM KSDIDRTPLP TGVSDMQINQ RGFTQELRLA SVGKSRLSWV TGTYLGSSRT
ETDMNRLMQR AVARSYLHTD YISDTGALFG QSTWSIVEGL RLTLGLRAEH TRLNGEQTYR
TMASRRHYTK DVSYTELLPM ASLSWDATDN ITPYISWSQG YLPGGFNVFS ANNRSNFYYE
PEYSTNYELG LKTHWLDDRL TANVTAFYSS IRDKQVREED PSGGVGTWKF TNSAQAHSSG
LEAEIKAYPL PGLELRGGVG YARSIVDDWT TTVNGVKRDF SGKRLPWAPE LTYNVGVGYT
HETGLFAQVD LFGAGKQYFD AENTLSDPGY QTINAQIGYH GDNWDVSVWG KNVLDARYAT
KKLAAAGQTI VEDGAPMTFG VSVGWRF
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