Gene Ddes_0411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0411 
Symbol 
ID7284075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp501045 
End bp501989 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content56% 
IMG OID643581201 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002479001 
Protein GI220903689 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAG ATTCGCTTAT TTATGTAGCA GGCCACCGCG GGCTTGCGGG CAGTGCCATT 
TGTCGCGCTC TTGCCCGTGA TGGCTATGAA AATCTGCTGA CGCGCACGCA CGCAGAACTG
GATCTGTGTG ATCAGGCGGC AGTGCGAACC TTTTTTGCGC AGTACCGGCC TGCCATCGTG
GTACTTGCCG CCGCCAAGGT GGGCGGCATT CATGCCAACG CCACATATCC AGCAGAATTT
ATCTACCAGA ACTTGCAGAT ACAGAACAAC GTCATAGACA GCGCCTACCG CAACGACTGC
AAAAAACTGC TGTTTCTGGG GTCATCGTGC ATATACCCCA AGATGTGCCC ACAGCCCATC
AAGGAAGAGT ATCTGCTCAC AGGGCCGCTG GAACCCACCA ATGATGCCTA CGCCCTGGCG
AAAATAGCAG GTATCAAGAT GTGCCAGGCC TACCGCAAGC AGTATGGCTT TGACGCCATC
AGCGCCATGC CAACCAATCT GTATGGCCCG GGCGATAATT ACCACCCGGA AAACAGCCAT
GTGATCCCGG CGCTTATCCG CCGTTTTCAT GAAGCCAAAA TGGCCGGAGC CGAAAAGGTG
ACCATATGGG GAACGGGCAA CGCCCTGCGC GAATTTCTCT ATGTGGATGA CATGGCCGAA
GCCTGTATTT TTCTGCTGAA AAACTACTCG GATTTTGAAC ACGTCAACGC GGGCTGCGGC
TCCGACATCA GCATCATCGA CACCGCCCGG CTTATTGCCC GTGTGGTAGG CTTTGAGGGC
AGCATTGACA CCGACCCCAC AAAGCCCGAT GGTACGCCGC GCAAACTTAT GGCCTCGGGC
AAGCTCTTCG GCATGGGCTG GAAGCCCAGG GTGGAGTTTG AGGAAGGCCT ACGGGCAACA
TACAGGGACT TCTGCGCCCG TAATGGGGCG GGGGCCGCAT GCTGA
 
Protein sequence
MDKDSLIYVA GHRGLAGSAI CRALARDGYE NLLTRTHAEL DLCDQAAVRT FFAQYRPAIV 
VLAAAKVGGI HANATYPAEF IYQNLQIQNN VIDSAYRNDC KKLLFLGSSC IYPKMCPQPI
KEEYLLTGPL EPTNDAYALA KIAGIKMCQA YRKQYGFDAI SAMPTNLYGP GDNYHPENSH
VIPALIRRFH EAKMAGAEKV TIWGTGNALR EFLYVDDMAE ACIFLLKNYS DFEHVNAGCG
SDISIIDTAR LIARVVGFEG SIDTDPTKPD GTPRKLMASG KLFGMGWKPR VEFEEGLRAT
YRDFCARNGA GAAC