Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0405 |
Symbol | |
ID | 7284069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 491975 |
End bp | 493225 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643581195 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_002478995 |
Protein GI | 220903683 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGATG CCCGGCTTGC CGTTTTGCAA AAACGCGTTG CCGCAGGCGA GGAAGAAGGT TGCGGCAGCG CCTATGCGCA GGCCTTTTGC GCAGCGCTCG GCGGCGGGTA CGCATTGCCA ACGGCCTCTG CGCGAATGGC GCTGCATGCG CTGCTGCGGC ATTATGGTCT TCGTGACGGC GATGAGGTCT TAGTCACAGG CTTTACCTGT TCCGTGGTGC TCAACGCCAT ACTGCGCTGC GGCGCGGCAC CCCGTTTTGT GGATATAGAC AGGCATACCT TGGGCACAAG CCCGGAATCA GTGGAAGCTG CCATTACCCC ACGAACTAAG GCGCTTATTG CTCAGCATAC CTTTGGCGTT CCCTGCGCCA TTGATTCGTT GCGCGCTTTG GCAACCCACT ATCATATCAA ACTTATTGAG GATGTGGCGA TTGCGTTTGG AAGCAAATAC CAGGGCAAGC CGCTTGGCGC ATGGGGCGAT GCCGCCTATT TTTCCACAGA CCACTCCAAA CCCTTAAATT CCCTTATTGG CGGAATGCTC TACACTACAG ACGAAAATCT GTACGAAAGA ATTTTTTCAG AGTATCAGGG CTGGCCGCAC CTGCCGCGCG AAAAACAGCA GGCACTGTTG GAACAGGTGC GTGTGGAGCG CGATAATTTC ACTCCGGCCC GCTACCGTTG GCACAACTTT GCCGCGTTGT TTGCCGGGTG CGATGCCCCT TCCCCTTTCC TTGATGCGGA CTACACCCCC TGGGCTGTGC AGGGCGACTA CCCCTATCCG GCAAAGATGC CGACAGTTCT GACAACCCTT GGGCTTGAGG CCCTGCGGCA GTGGCCTGTT GTTGCGGATG AACGGTGCCA TTGGTTCAAA AAAATTTCCG AAGTGTTTTA CAGAAATAAT TGCGGGGGTA TGATTCCTGC GGGCTTTCAG AACATTGGCA AAGAGGTTGT GCCGCTTCGC TTTGCTTTCT GCCTGCCTGC CGTCTGCGGG CCGCTACGTG AAAACAAAGG CTTGTGGCGG GCCGTCAACG CGTTTTTTCC GGCAAACTGG ATATGGTTTC AGGATCCTGT GGTTTGCCGG GCTACAGATA TAACCGCCTA TGGCTATACG CCGGGAACCT GCCCCGTGGC CGAGGAGGTT GGCCGCGGCA TTGTGACGAT TCCACTGGAT GTGCCCTCCC CTTATGCAGA CAGATTTATG CAAAATGTGG AGAATCTTTG TCGTGAGCTT CAGCGGCTGC CTCGGGCTTA A
|
Protein sequence | MDDARLAVLQ KRVAAGEEEG CGSAYAQAFC AALGGGYALP TASARMALHA LLRHYGLRDG DEVLVTGFTC SVVLNAILRC GAAPRFVDID RHTLGTSPES VEAAITPRTK ALIAQHTFGV PCAIDSLRAL ATHYHIKLIE DVAIAFGSKY QGKPLGAWGD AAYFSTDHSK PLNSLIGGML YTTDENLYER IFSEYQGWPH LPREKQQALL EQVRVERDNF TPARYRWHNF AALFAGCDAP SPFLDADYTP WAVQGDYPYP AKMPTVLTTL GLEALRQWPV VADERCHWFK KISEVFYRNN CGGMIPAGFQ NIGKEVVPLR FAFCLPAVCG PLRENKGLWR AVNAFFPANW IWFQDPVVCR ATDITAYGYT PGTCPVAEEV GRGIVTIPLD VPSPYADRFM QNVENLCREL QRLPRA
|
| |