Gene Ddes_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0405 
Symbol 
ID7284069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp491975 
End bp493225 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content56% 
IMG OID643581195 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_002478995 
Protein GI220903683 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATG CCCGGCTTGC CGTTTTGCAA AAACGCGTTG CCGCAGGCGA GGAAGAAGGT 
TGCGGCAGCG CCTATGCGCA GGCCTTTTGC GCAGCGCTCG GCGGCGGGTA CGCATTGCCA
ACGGCCTCTG CGCGAATGGC GCTGCATGCG CTGCTGCGGC ATTATGGTCT TCGTGACGGC
GATGAGGTCT TAGTCACAGG CTTTACCTGT TCCGTGGTGC TCAACGCCAT ACTGCGCTGC
GGCGCGGCAC CCCGTTTTGT GGATATAGAC AGGCATACCT TGGGCACAAG CCCGGAATCA
GTGGAAGCTG CCATTACCCC ACGAACTAAG GCGCTTATTG CTCAGCATAC CTTTGGCGTT
CCCTGCGCCA TTGATTCGTT GCGCGCTTTG GCAACCCACT ATCATATCAA ACTTATTGAG
GATGTGGCGA TTGCGTTTGG AAGCAAATAC CAGGGCAAGC CGCTTGGCGC ATGGGGCGAT
GCCGCCTATT TTTCCACAGA CCACTCCAAA CCCTTAAATT CCCTTATTGG CGGAATGCTC
TACACTACAG ACGAAAATCT GTACGAAAGA ATTTTTTCAG AGTATCAGGG CTGGCCGCAC
CTGCCGCGCG AAAAACAGCA GGCACTGTTG GAACAGGTGC GTGTGGAGCG CGATAATTTC
ACTCCGGCCC GCTACCGTTG GCACAACTTT GCCGCGTTGT TTGCCGGGTG CGATGCCCCT
TCCCCTTTCC TTGATGCGGA CTACACCCCC TGGGCTGTGC AGGGCGACTA CCCCTATCCG
GCAAAGATGC CGACAGTTCT GACAACCCTT GGGCTTGAGG CCCTGCGGCA GTGGCCTGTT
GTTGCGGATG AACGGTGCCA TTGGTTCAAA AAAATTTCCG AAGTGTTTTA CAGAAATAAT
TGCGGGGGTA TGATTCCTGC GGGCTTTCAG AACATTGGCA AAGAGGTTGT GCCGCTTCGC
TTTGCTTTCT GCCTGCCTGC CGTCTGCGGG CCGCTACGTG AAAACAAAGG CTTGTGGCGG
GCCGTCAACG CGTTTTTTCC GGCAAACTGG ATATGGTTTC AGGATCCTGT GGTTTGCCGG
GCTACAGATA TAACCGCCTA TGGCTATACG CCGGGAACCT GCCCCGTGGC CGAGGAGGTT
GGCCGCGGCA TTGTGACGAT TCCACTGGAT GTGCCCTCCC CTTATGCAGA CAGATTTATG
CAAAATGTGG AGAATCTTTG TCGTGAGCTT CAGCGGCTGC CTCGGGCTTA A
 
Protein sequence
MDDARLAVLQ KRVAAGEEEG CGSAYAQAFC AALGGGYALP TASARMALHA LLRHYGLRDG 
DEVLVTGFTC SVVLNAILRC GAAPRFVDID RHTLGTSPES VEAAITPRTK ALIAQHTFGV
PCAIDSLRAL ATHYHIKLIE DVAIAFGSKY QGKPLGAWGD AAYFSTDHSK PLNSLIGGML
YTTDENLYER IFSEYQGWPH LPREKQQALL EQVRVERDNF TPARYRWHNF AALFAGCDAP
SPFLDADYTP WAVQGDYPYP AKMPTVLTTL GLEALRQWPV VADERCHWFK KISEVFYRNN
CGGMIPAGFQ NIGKEVVPLR FAFCLPAVCG PLRENKGLWR AVNAFFPANW IWFQDPVVCR
ATDITAYGYT PGTCPVAEEV GRGIVTIPLD VPSPYADRFM QNVENLCREL QRLPRA