Gene Ddes_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0390 
Symbol 
ID7284053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp474676 
End bp475500 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content60% 
IMG OID643581180 
Productnitroreductase 
Protein accessionYP_002478981 
Protein GI220903669 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00534305 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTAT TTACTGTTGA TCATGACCTG TGCCGCAAAG ACGGCATCTG CGCCCTTGTC 
TGTCCTGTAC ATATTATTGA CGCCGAACCG GGTAACTATC CTGTTCTGGA CAAGCACAAG 
GCTGTATACT GTCTCGGCTG CGGCCAGTGC ATGGCCTTTT GTCCCACCCT GGCCTGTACG 
GCTCCCGGCC TTGAGCGCGA AGACTGCCGC CCTCTCAGCG GGCAGGATAT GCCCACGCCC 
CGGCAGGCTG ACGAACTTGC TTTTTCGCGC CGGTCTGTGC GCAATTTTAA AGATAAAACC 
ATACCCCGCC AGGAGCTGGA AGACCTGCTT GCGGCGGTTC GTTTTGCCCC CACGGCAAAA 
AATACGCAGA ATCTGCGCTG GATACTGCTG GAATCGCGTG AGCGGGTTGT GCAGCTGGCT 
GAACTGGTGG TGGCCTGGAT GCGCGAACTG CCCCGCATTG ATCCGGCGCT TGATGAGGCC 
ATGCATGCTG GCGGGCTTGT GCGCGCGTGG GACAGGGGGG TGGACGTAAT CACCCGCACT 
GCCCCGCAAC TGGCTGTGGT GGTTGCCCCC CAGTGGCGCT GGGGCCAGCC GGATGCCATT 
ATTGCCGCCA CCTACCTGGA ACTGTTGGCG CAGGCCCGGG GCATAGGCTG CTGTTGGGGC 
GGATATTTGT GCATGGCTTT CGAGCATCCC GCCGCGCAGG GCGTGCGGGA TTTTCTTGGT 
CTGGGCGAAG GCGAGATGGC TTTTGCCGCG CAGATGATGG GCTATCCGCG CTTCAAGGCC 
CATGCCAGGC CGCCGCGCAA AAATGCCCAT ATCACCTGGA AATAG
 
Protein sequence
MNVFTVDHDL CRKDGICALV CPVHIIDAEP GNYPVLDKHK AVYCLGCGQC MAFCPTLACT 
APGLEREDCR PLSGQDMPTP RQADELAFSR RSVRNFKDKT IPRQELEDLL AAVRFAPTAK 
NTQNLRWILL ESRERVVQLA ELVVAWMREL PRIDPALDEA MHAGGLVRAW DRGVDVITRT 
APQLAVVVAP QWRWGQPDAI IAATYLELLA QARGIGCCWG GYLCMAFEHP AAQGVRDFLG 
LGEGEMAFAA QMMGYPRFKA HARPPRKNAH ITWK