Gene Ddes_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0385 
SymbolileS 
ID7284048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp469073 
End bp471889 
Gene Length2817 bp 
Protein Length938 aa 
Translation table11 
GC content60% 
IMG OID643581175 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_002478976 
Protein GI220903664 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00152699 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATT ATAAAAAAAC GCTGAACTTG CCTCAAACCG CTTTTCCAAT GAAGGCCAAT 
CTGGCCCAGC GTGAGCCGGA AGCCATCAAG AAGTGGGAAG CCGCCAATGC CTGTGCCGCC
ATGGTTGAGG CCTCGGGCAG CGAGGGAACC TACATCCTGC ATGACGGCCC GCCCTATGCC
AACGGGCATC TGCACATGGG GCACGCGCTG AACAAGATTC TCAAGGATAT TATCGTCAAG
TCGCGCAACA TGGCGGGCTA TGCCTCGTGG TATGTTCCCG GCTGGGACTG CCATGGCCTG
CCCATCGAAC ACAAGGTGGA GCAGGACCTC AAGGAAAAAA AGAAAAGCCT GCCCGCCCAT
GTGGTGCGCA AGCTCTGCCG CGAATATGCC AACAAATGGC TTGATGTGCA GCGCAAGGAA
TTCAAGCGCC TGGGTGTTCT GGGTGACTGG GATCATCCCT ACATCAGCAT GGACCCGGCG
TATGAGGCCG TCACGGCCGG GGAGCTTGCC AAGTTTGTGG CTGCCGGTGG CGTTGCGCGC
GCCAAGAAGC CCATTTACTG GTGCTGCTCC TGCCATACGG CGCTTGCCGA GGCGGAAGTG
GAGTATAACG ACCACACTTC GCCCTCTGTG TATGTGCGCT TCGCTCTGCC CGATGAAGGC
CTGAAAAAGG TCTTTGCCGC CGCTGACCCG GCGCGCGCGC ATGTGGTCAT CTGGACTACC
ACGCCGTGGA CCCTGCCGGA TAATATGGCC GTATGCCTGC ACCCCGAGTT TACCTATGCG
CTGGTGGAGG CCGAAGGCAG CCAGTACATT CTGGCGGAAG AGCTGGTGGC CTCCTGCGCC
GAGACGTTCG GCTGGAGTGA ATATACCATT CTTGACCGCG CCACCGGAGA ACGCCTTGAA
GGACTCAAGG CGCGCCATCC CTTTTATGAC AGGCAGTCGT CGCTGGTGCT GGGCCTGCAT
GTGACCCTGG ATGCCGGTAC GGGCTGCGTA CACACTGCAC CCGGCCACGG GCGTGAAGAC
TATGATGTGG CCCTCAAGTA CGGGCTGGAA ATCTATTCAC CGATGGATGA CGCCGGGCGC
TTTTTGCCTG CTGTGGAATT TTTCGCCGGG CTTAACGTTT TTGAAGCCAA CCCCAAGGTT
GTTGAAAAGC TTGAAGAAGT GGGCGCATTG CTGCAAAAGG GCAAAATCCG CCACTCCTAC
CCGCACTGCT GGCGCTGTAA GGAACCGGTC ATCTTCCGTG CGACCACCCA GTGGTTTATC
AGCATGGAAA AGAACGACCT GCGTACCCGC GCCCTCAAGG CCATTGATGA AGAAGTGCGC
TGGATTCCCG CCTGGGGCCG CGAGCGCATC CATAACATGG TTGAGTTCCG CCCGGACTGG
TGCATCTCGC GCCAGCGGCA GTGGGGCGTA CCCATTCTGG CCCTGCTGTG CGAAGACTGC
GGCGAGGCCT GGAACGATCC GGCATGGATG CAGGAAATCG CCGCCCGCTT TGCCAAGCAT
CCCACGGGCT GCGACTACTG GTACGAAGCC GAACTGAAAG ATGTCGTGCC TGAAGGTCTT
GCCTGCCCCC ACTGTGGCGG CAACCACTGG AAGCGCGAAA CAGACATTCT TGATGTCTGG
TTTGACTCCG GCACAAGCTT TGCCGCCGTG TTGGAAAAAC GCCCCGAGCT GGGCTTTCCC
GCCGACCTGT ACCTTGAAGG CTCGGACCAG CACCGCGGCT GGTTCCACAG CTCGTTGCTG
GTCAGCGAGG GTACACGCGG CTGCGCGCCT TACCGCGCCG TGCTCACTCA CGGCTATGTC
GTGGACGGCG ACGGCCGCAA GATGTCCAAG TCCGTGGGCA ATGTCATTGC GCCGCAGGAG
CTTATTGAAA AGTTCGGCGC TGAAATCGTG CGCCTGTGGG TGTCTTCGGT GGAATACCGC
GAAGACATCC GCCTTTCGGA CGAAATTCTC GGCCGCCTGG TGGATGCCTA CCGTCGTATC
CGCAATACCT GCCGTTTTAT CATGGGCAAC CTGAGCGATA TTACCGCCCA CGACCTGCTG
TCGCTGGACA GGCTGCAGCC GCTGGACCGC TTTGCCCTGG ACGTGGCCGG GCGTGTGCAC
GAGCGTGTGC AGCAGGCCTA TATGGATTTT GACTTCCACA AGGTCTACCA CACCCTGCAC
AACTATTGCG TCACGGACCT TTCTTCCGTG TATCTGGATA TTCTTAAAGA CCGCCTCTAT
GCCTCTGCAC CGCACAGCGA TGAACGTCGC TCCGCCCAGA CGGCCCTGTG GCATATCCTG
TGCCTTTTGT TGCGTGATAT GGCCCCGGTA TTGTCCTTTA CCGCCGAGGA AATCTTCAGT
CACCTGCCGG AGAGCCTGCG CGGGCCGGAA ACAACAGTCT TTGCCCTGCC GCCGCTGGCT
GCGGCCCCCT ACCTGCTGGA TGAAGGCACG CGTGATGACT GGAACGTGCT GCTGGCCGTG
CGCGGCGCCG TGACAAAGGC CATTGAGCCT ATGCGCCGTG AGGGTATTAT CGGGCACTCG
CTGGATACGC GCATCACCCT TTTTGTGGCG GACGAACTGC GACAGCGCCT GGAAGGCCTG
CATACCGACC TGCGCGCCGT GTGCATTGTG TCGCAGCTGC ATCTGGAAGC GCTGGACCGC
GCCCCGCAGG CAGCCTACCG GGATGAAGAG GTGGCGGGCC TTGCCATCGG CGTTGAAAAG
GCCAGAGGCG AAAAATGCGA ACGCTGCTGG ATTTACAGCA CCGAACTCGG CTCCGACGCT
TCGCATCCCG CCTTGTGTCC GCGCTGCACA GCGGTTATCA AGGGTATGGA ATCCTGA
 
Protein sequence
MSDYKKTLNL PQTAFPMKAN LAQREPEAIK KWEAANACAA MVEASGSEGT YILHDGPPYA 
NGHLHMGHAL NKILKDIIVK SRNMAGYASW YVPGWDCHGL PIEHKVEQDL KEKKKSLPAH
VVRKLCREYA NKWLDVQRKE FKRLGVLGDW DHPYISMDPA YEAVTAGELA KFVAAGGVAR
AKKPIYWCCS CHTALAEAEV EYNDHTSPSV YVRFALPDEG LKKVFAAADP ARAHVVIWTT
TPWTLPDNMA VCLHPEFTYA LVEAEGSQYI LAEELVASCA ETFGWSEYTI LDRATGERLE
GLKARHPFYD RQSSLVLGLH VTLDAGTGCV HTAPGHGRED YDVALKYGLE IYSPMDDAGR
FLPAVEFFAG LNVFEANPKV VEKLEEVGAL LQKGKIRHSY PHCWRCKEPV IFRATTQWFI
SMEKNDLRTR ALKAIDEEVR WIPAWGRERI HNMVEFRPDW CISRQRQWGV PILALLCEDC
GEAWNDPAWM QEIAARFAKH PTGCDYWYEA ELKDVVPEGL ACPHCGGNHW KRETDILDVW
FDSGTSFAAV LEKRPELGFP ADLYLEGSDQ HRGWFHSSLL VSEGTRGCAP YRAVLTHGYV
VDGDGRKMSK SVGNVIAPQE LIEKFGAEIV RLWVSSVEYR EDIRLSDEIL GRLVDAYRRI
RNTCRFIMGN LSDITAHDLL SLDRLQPLDR FALDVAGRVH ERVQQAYMDF DFHKVYHTLH
NYCVTDLSSV YLDILKDRLY ASAPHSDERR SAQTALWHIL CLLLRDMAPV LSFTAEEIFS
HLPESLRGPE TTVFALPPLA AAPYLLDEGT RDDWNVLLAV RGAVTKAIEP MRREGIIGHS
LDTRITLFVA DELRQRLEGL HTDLRAVCIV SQLHLEALDR APQAAYRDEE VAGLAIGVEK
ARGEKCERCW IYSTELGSDA SHPALCPRCT AVIKGMES