Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0380 |
Symbol | |
ID | 7284037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 456912 |
End bp | 458579 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643581164 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002478971 |
Protein GI | 220903659 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAAC ATACTATGGG CACTGTCGCG CAAGGACGCA AGGGGGCAGG TGCCGGTATT CGCCTTTGTG TGCTGGCTGC CCTGTGCTGC CTGCTGCTGG CCGGAGGCTG CGCCTCGCGC CAGGGCGGCT CGGGTGGCGG CGGTGCTTCT TTTTCCGTCC CTGATGACGA TCCCACGCCC TTGAGTCCCA AAGAGGTCGC TGCCCTCAAT TCTACCGGGC ATGTTGATAA AAGCCTGCCC CCGGAAGCTA TGGACGATGT GGCACGTCAA TATAAGTATT TTTTGCGCAA GGGACGCAAT TCCGTATGTG TGTTCTCGAA ACGCGCGGAA AACTACCTGG CCTATGCCCG CAAGGTGTTT CGCTCGCGCG GCATGCCCGA AGAACTGGCT TACCTTGCCA TTGTGGAAAG CGGGTACAGG GTGGACGCCC GTTCGCCTGT GGGCGCTACC GGAGCCTGGC AGTTCATGCC GCCTACGGGT GAGCGCTTCG GGTTGACGCA GAACTGGTTT ACTGACGAAC GCCTTGACCC GTACGAATCC ACGGAGGCTG CGGCGGACTA TCTGCAGAAG CTGCACGAGT ATTTCGGCGA CTGGCCCACG GCCATCGCGG CCTATAACGC GGGTGAAGGC AAGATCGGCC GTGCCAAGGC GGGTACAGGC GGCAAGGATT TTTTTGAGGT CAAGGCCCGC AATCACATGC TGGATGAAAA AGCGCAACTG CGCGATGAGA CCAAGCAGTA TGTGCCGCGC TTTCTGGCAG TTACAAAAAT CATGCGTAAT CTGCCCGAAC TGGGTTTCGA GCCGATCAGT CCCGAAAGCG CGCCCGGCGT GCTGCGCCTT ACGGCGCGCC CCGGAACCGA TCTCAACGGC CTGGCTGATG CCTGCGGCAT GAGCTGGGGC GATTTCATTT CCTATAACCG TCATCATAAA CGCCGTATTA CTGATACGGA CCGTTCCACC TTTGTCTATG TTCCCGCCAG AATAGAGCGC CAGGCCACGG CCTTTCTTTC TTCGCCCCGT TGCACCGCCT ATGCGGACTG GGGCGCGGTG CGCGTGGCCA GCAATGCGGA TTCGTGGGAC AAGATCAGCC GCCGTTGCGG TATCCCTGCG ACGCAGTTGC GCGCCCTTAA TCCCGGTGAA AGCCGCCTGC GCGCCGGGCA GACCGTGCTT GCGCCGCGCT CGGTGGACAT GTCCTCCAGG GCTGTGGCCG CGCTGGACAA CAAGGTTCAG GCCCAGTCGG GCAACCGGGG GCGGGCTTCG GCACAGCCAG CAGGACGGCA GACAGCGGCG CAGGGCGGCA GTCATACGCT TCAGGCTGGT GAAACCCTGT ATGCCGTGGC CCGTCAGTAT AACATCAGCG TGAAGGACCT TCAGGACCAT AATAATATAA GCAGTCCCAA TATGATTCAT GCCGGAACCG TGCTGCGCAT CCCCGCCCGC GCCGTGGCCC AGGCCGGGCC TGTTTCCGGC GGATCTGACG GCAGGGTGGG GCGCAAGGCC GGTAGCGGAG CGGCAAAGGC CGCCAAAAGC ACCTATCTTG TGCAGGCCAG AGACAGCCTG TGGAAGATCG CCCGTGAACA TAATGTAAGT GTTGAAGACC TCAAGCGTTG GAACGGTGTG GATGAAAAGA CCCTGCGGGC CGGATCCGTG CTGGTGGTGG AGCAGTAG
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Protein sequence | MTEHTMGTVA QGRKGAGAGI RLCVLAALCC LLLAGGCASR QGGSGGGGAS FSVPDDDPTP LSPKEVAALN STGHVDKSLP PEAMDDVARQ YKYFLRKGRN SVCVFSKRAE NYLAYARKVF RSRGMPEELA YLAIVESGYR VDARSPVGAT GAWQFMPPTG ERFGLTQNWF TDERLDPYES TEAAADYLQK LHEYFGDWPT AIAAYNAGEG KIGRAKAGTG GKDFFEVKAR NHMLDEKAQL RDETKQYVPR FLAVTKIMRN LPELGFEPIS PESAPGVLRL TARPGTDLNG LADACGMSWG DFISYNRHHK RRITDTDRST FVYVPARIER QATAFLSSPR CTAYADWGAV RVASNADSWD KISRRCGIPA TQLRALNPGE SRLRAGQTVL APRSVDMSSR AVAALDNKVQ AQSGNRGRAS AQPAGRQTAA QGGSHTLQAG ETLYAVARQY NISVKDLQDH NNISSPNMIH AGTVLRIPAR AVAQAGPVSG GSDGRVGRKA GSGAAKAAKS TYLVQARDSL WKIAREHNVS VEDLKRWNGV DEKTLRAGSV LVVEQ
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