Gene Ddes_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0351 
Symbol 
ID7284008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp429305 
End bp429997 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content60% 
IMG OID643581136 
Productaspartate racemase 
Protein accessionYP_002478943 
Protein GI220903631 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1794] Aspartate racemase 
TIGRFAM ID[TIGR00035] aspartate racemase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTA TCGGTCTTCT GGGCGGTATG AGCTGGGAAA GCACGGTTTC ATACTATCAG 
ATTATCAACC GTGTGGTCAG GCAACGCCTT GGCGGTCTGC ATTCGGCAAA ATGCCTGTTG
TACAGTGTGG ATTTTGCCGA AATTGAGGCC TGCCAGGCCG AAGGCCGCTG GGATGAGGCG
GCGGCCGCCC TGGCCGGGGG CGCCCGGCGT CTTGAACGCG GCGGCGCGGA TTTTTTTCTG
ATCTGCACCA ATACCATGCA CAAGGTGGCT CCCCAGGTGG CAGCGGCCGT GCAGATTCCC
CTGCTGCACC TGGCCGGGGC TACGGCAGAT GAACTGCTGC GCCGGGGGAT GACCAGGGCT
GCCTTGCTGG GAACGCGCTA CACGATGGAA GAAGATTTTT ACAGCGGAGT TTTGCGGCAA
CGGGGTATTG AGGTTCTTGT GCCTGATGCC CAGGACCGGG GCATGATAAA CGATGTGATT
TTTCAGGAAT TGTGCCTGGG GCGCATTGAA GACGGTTCAC GCCGCAAGAT GTTAACGGTT
ATCGAGGGCC TCCAGGCCAG GGGCGCACAA GGGGTTGTGC TCGGCTGTAC AGAGATCGGC
CTGCTGGTGC AGCCGGAACA TACGGATGTT CCCTTGCTGG ATACCACCCT GCTGCACGCC
ACGGCAGCGG CGGAAATGGC GTTGGGCCGC TGA
 
Protein sequence
MKVIGLLGGM SWESTVSYYQ IINRVVRQRL GGLHSAKCLL YSVDFAEIEA CQAEGRWDEA 
AAALAGGARR LERGGADFFL ICTNTMHKVA PQVAAAVQIP LLHLAGATAD ELLRRGMTRA
ALLGTRYTME EDFYSGVLRQ RGIEVLVPDA QDRGMINDVI FQELCLGRIE DGSRRKMLTV
IEGLQARGAQ GVVLGCTEIG LLVQPEHTDV PLLDTTLLHA TAAAEMALGR