Gene Ddes_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0340 
Symbol 
ID7283997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp414091 
End bp415494 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content62% 
IMG OID643581125 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_002478932 
Protein GI220903620 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.307313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAATG ACAAGTTGAA AATGTACGGC GGCATATGGG GCGGGCTTGT TCCCCTTGCC 
ATACTGGTGG TGGGGCTTGT GTGGCTTTCC GTGGCGGGCC GGGGCGGCAC CAAGCCGTTC 
TGGGCCTGCG CCTGGCTGGC GCTGGCAGTG GGGCTATTTT TTGCCAGAAG CAAAGAGGAA 
TACTGCAAGG CCGCCATGCG CGGCATCGGC GACAAGACCG GTATTGTCAT CGTTACGGCT 
TGGCTGTTCG CGGGGGTGTT CGGCAAGCTG ATGGCGGCGG GGGGGCTGGT GGACGGGCTG 
CTGTGGCTCG GCATGACCAC AGGGGCGCAG GGGGCGGTAT TTACCCTGCT GGTCTTTGCC 
GCGGCCATGC TTTTTGCCCT GGGTACGGGA ACCAGCACCG GTACGTGCAT CGCCCTGACC 
CCGGTGCTGT ACCCGGCGGG ATATTTCCTT GGGGCGGATC CGGCCATGCT CGGCCTGGCC 
ATTCTGTCAG GCGCGGCCTT CGGTGACAAC CTGGCTCCCA TATCGGACAC GACCATTGTG 
TCTGCGTACA CACAGGGCGC CACCATGCGC GACGTCGTGC GAAGCCGCTT TCCGCTCTGT 
ATTGTGGCGG CGGCCTTTAC CGCGCTGGTA TTCATGATTT TCGGCGGCGG GGGCGAAACC 
GTGGCGCTGC CCGAGATCCA GGCCAACCTG AATCCTTCCG GCATATTCAT GCTGGTGGCC 
CTGATCGTGG TTGTGGTGGC TGCGCTCAGC GGCAGGCATA TCATTGAGTC GCTCATTTAC 
GGCAACGTCA CGGCGGCGTT GGTGGGTATG CTTATCGGCA CACTCAAGCC CGGCGATATT 
TTCGGTATTC CCGCCAAGGC GGGGGCTTCT ACGGGGATCA TCCAGTCCGG TATTGACGGC 
GTGGTGGGCG CGATCATTTT TGCCATCCTT ATTCTTGCCG TTACCCAGAT CCTCGTGGAA 
TGCGGCATAA TGACCAAGAT CCTGGAATTT GCCCACAAGA GTGTGGTCAG CACAGTGCGT 
CAGGCTGAAC TGTTTATCGT GGGGGTGACC ATTCTGGCGT CCATTCCCAT TTCCGCCAAT 
GCTCCGGCGG AACTGCTGGT GGGGCCGAGC CTTGTGCGCC CCATAGGCGA AAAGTTCAAC 
CTTGCCCCGG CGCGGCGCGC GAACCTTATG GACTGCGCGG TGTGTACCAT CTTCTTTATT 
CTGCCGTGGC ACATTGTGGT GGCCGCCTGG TACGGCGCCA TGGTGAGCGC GGCAGAAAGC 
TACGGTATTG CGGCGCCGCC CATCAGCACG GCTCTGTACA ATCCGTATTC GTGGGCTTTG 
CTGGTGGTGC TGATATTCTC TGCCGTCACC GGCTGGAACC GGCGGTATGC CACGCCCGAA 
GACGCGGCGC CCGAAGCGGC CTAA
 
Protein sequence
MQNDKLKMYG GIWGGLVPLA ILVVGLVWLS VAGRGGTKPF WACAWLALAV GLFFARSKEE 
YCKAAMRGIG DKTGIVIVTA WLFAGVFGKL MAAGGLVDGL LWLGMTTGAQ GAVFTLLVFA 
AAMLFALGTG TSTGTCIALT PVLYPAGYFL GADPAMLGLA ILSGAAFGDN LAPISDTTIV 
SAYTQGATMR DVVRSRFPLC IVAAAFTALV FMIFGGGGET VALPEIQANL NPSGIFMLVA 
LIVVVVAALS GRHIIESLIY GNVTAALVGM LIGTLKPGDI FGIPAKAGAS TGIIQSGIDG 
VVGAIIFAIL ILAVTQILVE CGIMTKILEF AHKSVVSTVR QAELFIVGVT ILASIPISAN 
APAELLVGPS LVRPIGEKFN LAPARRANLM DCAVCTIFFI LPWHIVVAAW YGAMVSAAES 
YGIAAPPIST ALYNPYSWAL LVVLIFSAVT GWNRRYATPE DAAPEAA