Gene Ddes_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0334 
Symbol 
ID7283991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp406765 
End bp407643 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content64% 
IMG OID643581119 
ProductPrephenate dehydrogenase 
Protein accessionYP_002478926 
Protein GI220903614 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGC ACAAAGACCA AAGCCGCTGC CGTGCCACAA CGGCAGACAG CCTGGATGCG 
GACACGGTGG ACTCAACGGA GGCCGGAAAA ACGAAAGAAC ACGCGGGCAG AACAGTCATT 
GTCGGTTCCC GGGGGCGCAT GGGGGCCATG CTTGTGGCCC GCGCCGAGGC TGCCGGTCTT 
GGTATCGTCG GGGTGGACGT TCCCCTTGCG CCGGAAAAGC TCTCGGAATC CTGCTCAGGG 
GCAGATATGG CCGTGCTGTG CGTTCCCGCT GCCGTATTCG GCGAGGTGGC GGCCGCAGTA 
TGCCCGCACC TGCCCGCGCG GGCGGTGTTG GCCGACATCA CTTCGGTGAA GGAACAGCCC 
ATGCGCCAGA TGGAGCGCGT CTGGCCCGGT CCCGTGGTGG GAACCCATCC TCTTTTCGGC 
CCCAGCCCGG AAGCGGAGGC AGACCTTCCC GTTGCCCTGA CCCCCGGCCG CAATGCGGAG 
CCGGAGCATG TGGCTCTGGT GGAAGCCTTT TTTACAAGAA TCGGCTGCCG TACCTTCATG 
ACCACGGCGG AAAAGCACGA CAAGGCCATG GCGCGCATAC AGAACATGAA CTTTATCACG 
AGCCTGGCCT ATTTCTCGCT GCTGGCCGGG CAGGATGACC TGCTGCCCTT TCTGACGCCG 
TCTTTCCGCC GCCGCCACAA TGCGGCCCGA AAAATGCTGA CGGAAGATGC CCGCCTTTTT 
GCCGGACTGT TTGAAGCCAA CGCTCACAGC CATGAGGCCG TGCGCCAGTA CCGGCAGATG 
CTCAACCTGG CTGCCGCCGG GGACATCGAC CTGCTCTGCC AGCGGGCAGC GTGGTGGTGG 
CCGGAAGAAT GCGGGCAGGA CGAGCTGGCA GAAGCCTGA
 
Protein sequence
MTAHKDQSRC RATTADSLDA DTVDSTEAGK TKEHAGRTVI VGSRGRMGAM LVARAEAAGL 
GIVGVDVPLA PEKLSESCSG ADMAVLCVPA AVFGEVAAAV CPHLPARAVL ADITSVKEQP 
MRQMERVWPG PVVGTHPLFG PSPEAEADLP VALTPGRNAE PEHVALVEAF FTRIGCRTFM 
TTAEKHDKAM ARIQNMNFIT SLAYFSLLAG QDDLLPFLTP SFRRRHNAAR KMLTEDARLF 
AGLFEANAHS HEAVRQYRQM LNLAAAGDID LLCQRAAWWW PEECGQDELA EA