| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0309 |
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| Symbol | |
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| ID | 7283965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 379240 |
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| End bp | 380835 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643581094 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002478902 |
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| Protein GI | 220903590 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCCA TCAGTAATGC CGGTCGCATG CGTCTGACGG GGGCAGTGTT TGTCCTGTCG
GTATTCATGC TTTCGGCCTG CTCCCTTGCG CCGCGCTACG AACGGCCTGA AATGGATATG
CCCGCCCAGT GGCGCACGGT GGATATGGGC GCCGCCCCGC TGAACACTGA CTGGTGGAAC
CGCTTCAATG ATCCGGTGCT TACCGCCCTG GTGGACGAGG CGCTGAAGAA CAACCAGGAT
ATTGCCGAAT CCCTTGCCAA GATCGATTCA GCGGCCTCGC AGGTGGGTAT AGCCACTGCG
GATCTGCTGC CCTCGGTCAG CGGCTCGGCT TCGTCCATGG CTCAGGGGGC TTCGGAAAAA
ACGCCCAACA CCATGCCCTT TGACAAGAGC GGTCTTTCCC GCACCACGGC CACCAATCAG
GCCGCGCTCA GCGCCTCGTG GGAGTTGGAC CTCTGGGGCA AGAACCGCAA TAACTACACC
ATGCTCAGCG ATGTGCTCAT GAGCACGGTC ATCGGGCATG AGGCCCTGCG TCTTTCGGTG
GCAGGGCAGA CGGCCCAGAG CTACTTTGCC CTGCTGGCCC TGGACATGCA GCTGGATACG
GCCCGCCGTA CGCTTAAAAC CCGCGAAGAT GCCTTCAGCA TCTACAGCAG CCGTTACAAG
CAGGGTGACA TTACCGAGCT TGACTGGCAG CGCGCCCGTG CAGAGGTTGA AATCGCCCGT
GCCCAGGTGC ACACCAGCAC CGTGGCCGTG GACAGGGCCG AAGCCGGACT GGCCGTGCTG
CTCGGGCGTT CGCCCCGTGA TATTATGGAA CGCGGCATGC CGCGCGGGCA GGCCATCGGC
ATGCTGCCGT CGCCCCCCGT GCTGCCTGAA GGTCTGCCTT CCGACCTGCT GCAGCGCAGG
CCGGACGTGC GTGCCGCCGA ATTCATGCTC ATGGCCAATA ACGCAAATAT CGGCGTGGCC
CGTGCCCAGT TCTTCCCCTC GGTGTCCCTT ACGGGTATGC TGGGTACGGT CAGTGCGGCC
GTGGGCAGCC TGTTTACCGG CCCTGCCGGA GCCTGGAGCT ACGGCGTCAC CGGTTCCATG
CCCCTGCTGG ATTTCGGCCG CACCTGGTAC AACGTCAAGG ATGCCGAAGC ACGTAAAAAG
GCTTCTGTGG CCGTATACCG CAAAACCGTG CAGACGGCGT TTGAAGACAT GCGCACATCG
CTGACCGCCC AGCGCGAGGC CGACGCCATC GTGCGCAGCA TGCAGATCCA GGTGGAAAGC
CTGCGCCGTG CCACTACCAT TGCCCGTCTG CAGTACGACA ACGGCTATAC GGACTACCTG
ACCGTTCTGG ATGCGGAACG CCAGCTTTTT GCTGCCGAAC TGCAACTGGC ATCGGCCCTG
CGTGACCGCC TGGACAACGT CGTGAGCGTT TGCATGGCCC TTGGCGGCGG CTGGAACGAC
CCCGGCGCCA GCCCGAGCTT TCCCGTGGTC AATACCGAAA AACTGCTGAA TCAGGAAACA
AGCGCCGGGG CATCCGGCAA GTCTTCGGGC AAGGCCGCGG CCGAATCCGC GCCTGCCGCG
CCTGAGGCCA GACCACAGGG TGGCGTGAGC CTGTAG
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| Protein sequence | MSSISNAGRM RLTGAVFVLS VFMLSACSLA PRYERPEMDM PAQWRTVDMG AAPLNTDWWN
RFNDPVLTAL VDEALKNNQD IAESLAKIDS AASQVGIATA DLLPSVSGSA SSMAQGASEK
TPNTMPFDKS GLSRTTATNQ AALSASWELD LWGKNRNNYT MLSDVLMSTV IGHEALRLSV
AGQTAQSYFA LLALDMQLDT ARRTLKTRED AFSIYSSRYK QGDITELDWQ RARAEVEIAR
AQVHTSTVAV DRAEAGLAVL LGRSPRDIME RGMPRGQAIG MLPSPPVLPE GLPSDLLQRR
PDVRAAEFML MANNANIGVA RAQFFPSVSL TGMLGTVSAA VGSLFTGPAG AWSYGVTGSM
PLLDFGRTWY NVKDAEARKK ASVAVYRKTV QTAFEDMRTS LTAQREADAI VRSMQIQVES
LRRATTIARL QYDNGYTDYL TVLDAERQLF AAELQLASAL RDRLDNVVSV CMALGGGWND
PGASPSFPVV NTEKLLNQET SAGASGKSSG KAAAESAPAA PEARPQGGVS L
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