Gene Ddes_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0287 
Symbol 
ID7283943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp341987 
End bp343231 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content62% 
IMG OID643581072 
ProductRadical SAM domain protein 
Protein accessionYP_002478880 
Protein GI220903568 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGC ACATGCACCA CGCCGGAGGG CACCCGGGCG GTATGCCCGG CAGCGCGGGC 
AACCCCATAA GCGGTCATCC CGGCCAGGCA GAAGACGGCA AGCACCGCGG GCATCCGGGC
GGGCACGGCA TGAGCGCGCC CCTGCGCACC CTTGAAGACG GCAGCCCCGC CTGCCGCCTC
ATCGCCTGGG AAGTCACGCG CTCCTGTAAC CTGGCCTGCA AGCACTGCCG CGCCGAGGCC
CACCCCGAAC CGTACCCCGG TGAGCTGTCC ACAGCCGAAG CCAAGGCCCT GATCGACACC
TTCACCGAGG TGGGCAAGCC CATCATCATC TTCACCGGTG GCGATCCCAT GATACGGCCC
GATGTGTATG AGCTGGTGGC CTACGCCCAC AGCAAGGGGC TGCCCTGCGC CTTTTCGCCC
AACGGCACCC TTATCACGCC GGAAACCGCG CAAAAAATCA AAAACGCGGG CGTCAACCGC
TGCTCCATCT CCATTGATGG AGCAGATGCC GCCAGCCACG ACAGCTTCCG CGGTGTTCCC
GGCGCGTTTG AAGCGTCCAT GCGCGGCATC GAATACCTCA AGGCCGCGGG CGTGCCGTTT
CAGATCAATA CCACGGTCAC ACGCAACAAC CTCACAAGTT TTAAAAAGAT ATTTGAGCTG
TGTGAGCGTA TCGGCGCGGC AGCCTGGCAC ATCTTTCTTC TGGTGCCCAT GGGCCGGGCC
GCGGGCCTGG CCGATCAGGT GATCACGGCC CAGGAATACG AAGACGTGCT CCACTGGCTG
TACGACTTCC GCAAAACCAC CAAAATGCAC CTCAAGGCTA CCTGTGCACC GCACTATTAC
CGCATCATGC GCCAGCGGGC CAAAGAAGAA GGCGTGAGCG TCACCCCCGA AAACTTCGGC
ATGGATGCCC TCACACGAGG CTGCCTCGGC GGCACGGGCT TCTGCTTTAT CAGCCATGTT
GGGCAGGTGC AGCCTTGCGG ATATCTGGAA CTTGATTGCG GCAATGTACG CCAAACGCCC
TTTCCCAAAA TCTGGCGCGA AAGCAAGCAT TTCTTGCAGT TCCGCGACCA GTCCTGCTAT
TCGGGCAAAT GCGGCGAGTG CGAGTATCAC AAGGTCTGCG GCGGCTGCCG CGCCCGCGCC
CACAGCATGG ACGGCGATCA TATGGGCGAG GAACCGCTGT GCACCTATAT TCCGGCCAAA
ATGCGCAAAA AGGGCCGGGA CGGCAAGTCC GGGGAGGAAA AATAA
 
Protein sequence
MSKHMHHAGG HPGGMPGSAG NPISGHPGQA EDGKHRGHPG GHGMSAPLRT LEDGSPACRL 
IAWEVTRSCN LACKHCRAEA HPEPYPGELS TAEAKALIDT FTEVGKPIII FTGGDPMIRP
DVYELVAYAH SKGLPCAFSP NGTLITPETA QKIKNAGVNR CSISIDGADA ASHDSFRGVP
GAFEASMRGI EYLKAAGVPF QINTTVTRNN LTSFKKIFEL CERIGAAAWH IFLLVPMGRA
AGLADQVITA QEYEDVLHWL YDFRKTTKMH LKATCAPHYY RIMRQRAKEE GVSVTPENFG
MDALTRGCLG GTGFCFISHV GQVQPCGYLE LDCGNVRQTP FPKIWRESKH FLQFRDQSCY
SGKCGECEYH KVCGGCRARA HSMDGDHMGE EPLCTYIPAK MRKKGRDGKS GEEK