| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0238 |
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| Symbol | |
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| ID | 7283892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 285696 |
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| End bp | 286730 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643581021 |
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| Product | phage portal protein, PBSX family |
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| Protein accession | YP_002478831 |
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| Protein GI | 220903519 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5518] Bacteriophage capsid portal protein |
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| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00721775 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC ACAAAAAGCG GCCCGGCGGG CAGCATGCGG CGGATACTAC GGGCGGCAAA
AGCCGGGCCA TAGCTTTCAG TTTTGGCGAA CCGGAAAGCG TAATGACAGG CGAGCTTTCG
CAGTACCTTG GCGTGTATTT GCAGGACAAC GGGCAGTATT ATCAAACGCC CGTGCCCCTG
ACCGGGCTTG CCCGGCTGCT GCGGGCCAAC GCCTACCACT GGCCCATGCT GGAATTTAAG
GTAAACAAGC TGTTGCGGGG CTTTATGGGC AGCGCGGCGC TTGACCGCAT AACCATGCGC
AAGGCAGCCA CAGACTATAT GGTGTTTGCC AACGCCTATT TGCAACGGCT GTACAACATG
TTTGGGCAGG TGGTGGGCTA TACCCATCTG GCGGCCATAA ACATGCGCCG TGCCAAGGCT
GACGACCAGT ACATCATGCT TGGCGTGGAC GGCAGCATGA CCACCTTTGA ACCGGGCGAA
GTGCTGCACG TTAAAAACTA TGACGTGTCG CAAGAAATTT ACGGTCTGCC CTCGTACCTG
GGGGCCATAC AGAGCATGCT GCTGCAAGAA GACGCCACTC TATTTCGCCG CCGTTATTAC
CGCAACGGCG CGCACATGGG CTATGTGTTC TATAGCAGCT CGGCCTATCT GGACCTTGAC
GATGAAAGCG CCTTGCGCAT GGCCATGAAG GAAAGCAAGG GCGTGGGGAA CTTTCGCAAC
CTGTTCTTGC ACATACCCAA CGGCAAGGAA AAAGACATTC AGATACTGCC TGTGGGCGAT
TTTTCTACCA AGGACGAGTT GGAAAAAATC AAGAACATAT CACGGGACGA CATTATCGCG
GCCCACCGCA TACCGCCCGC CCTGGCCAAC ATTATACCCT CGGTAGCCGG GGGCCTGGGC
GACATTACAG CGGCGGACGC CGTGTATGTT CAAAACGAGA TTGAGCCTTT GCAGGAAGAC
CTGGGCGTGG TGAACGACGA CTTGCCGGAA CATTTGCGGG TACACTTTGC GCCCGCAACC
GCGCCCATGC CTTGA
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| Protein sequence | MKKHKKRPGG QHAADTTGGK SRAIAFSFGE PESVMTGELS QYLGVYLQDN GQYYQTPVPL
TGLARLLRAN AYHWPMLEFK VNKLLRGFMG SAALDRITMR KAATDYMVFA NAYLQRLYNM
FGQVVGYTHL AAINMRRAKA DDQYIMLGVD GSMTTFEPGE VLHVKNYDVS QEIYGLPSYL
GAIQSMLLQE DATLFRRRYY RNGAHMGYVF YSSSAYLDLD DESALRMAMK ESKGVGNFRN
LFLHIPNGKE KDIQILPVGD FSTKDELEKI KNISRDDIIA AHRIPPALAN IIPSVAGGLG
DITAADAVYV QNEIEPLQED LGVVNDDLPE HLRVHFAPAT APMP
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