Gene Ddes_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0198 
Symbol 
ID7283852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp249832 
End bp250518 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content64% 
IMG OID643580982 
Productendonuclease III 
Protein accessionYP_002478792 
Protein GI220903480 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAA AAAATTCCCG CCCGGCACGG GCGCAAAAAG TTCTGGCAGC CCTGCGCACC 
CGCTACCCCG CCCCCCATAC CCATCTGGAC GCCGAAACGG CGTGGCAGCT GCTGGTGGCT
ACGGTGCTGG CGGCCCAGTG TACGGACGCC CGGGTCAACA CCGTCACTCC GGAACTGTTC
CGCCGCTGGC CCGGCCCCGC CGACCTCATG GGGGTTCCGG TTGAGGAACT GGAGGCGGTC
ATACGCTCCA CGGGTTTTTA CCGCAGCAAG GCCAAAAACC TGCTGGGGGC CGCAGCCCGC
GTATGCGAGG TATACGACGG GCGGATCCCC AACAGCCTTG AAGAACTCAT CACCCTGCCC
GGTGTGGCCC GCAAGACGGC CAATGTGGTA CTGTTCGGCG CTTTCGGCAT CAATGAGGGT
CTCGCGGTAG ACACACACGT CAAGCGCATC AGCTACAGGC TCGGGCTGAC CGAATCAACG
GACCCCGTTG TTATCGAGCG CGACCTTATG GCCCTTTTCC CCCGTGAAGA ATGGGGTGAT
GTGAACCACC GCATGGTCTG GTTCGGGCGT GAGGTATGCG AAGCGCGCAA GCCCCTGTGC
GGCCAGTGCG AAATGGCGAT CTTCTGCCCC AGGCTGGAGC CGCCCAAAAC ACCGCGCCCG
GCCCGACGCA AGGTTCCGCC GGCCTAG
 
Protein sequence
MSAKNSRPAR AQKVLAALRT RYPAPHTHLD AETAWQLLVA TVLAAQCTDA RVNTVTPELF 
RRWPGPADLM GVPVEELEAV IRSTGFYRSK AKNLLGAAAR VCEVYDGRIP NSLEELITLP
GVARKTANVV LFGAFGINEG LAVDTHVKRI SYRLGLTEST DPVVIERDLM ALFPREEWGD
VNHRMVWFGR EVCEARKPLC GQCEMAIFCP RLEPPKTPRP ARRKVPPA