Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0198 |
Symbol | |
ID | 7283852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 249832 |
End bp | 250518 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643580982 |
Product | endonuclease III |
Protein accession | YP_002478792 |
Protein GI | 220903480 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCAA AAAATTCCCG CCCGGCACGG GCGCAAAAAG TTCTGGCAGC CCTGCGCACC CGCTACCCCG CCCCCCATAC CCATCTGGAC GCCGAAACGG CGTGGCAGCT GCTGGTGGCT ACGGTGCTGG CGGCCCAGTG TACGGACGCC CGGGTCAACA CCGTCACTCC GGAACTGTTC CGCCGCTGGC CCGGCCCCGC CGACCTCATG GGGGTTCCGG TTGAGGAACT GGAGGCGGTC ATACGCTCCA CGGGTTTTTA CCGCAGCAAG GCCAAAAACC TGCTGGGGGC CGCAGCCCGC GTATGCGAGG TATACGACGG GCGGATCCCC AACAGCCTTG AAGAACTCAT CACCCTGCCC GGTGTGGCCC GCAAGACGGC CAATGTGGTA CTGTTCGGCG CTTTCGGCAT CAATGAGGGT CTCGCGGTAG ACACACACGT CAAGCGCATC AGCTACAGGC TCGGGCTGAC CGAATCAACG GACCCCGTTG TTATCGAGCG CGACCTTATG GCCCTTTTCC CCCGTGAAGA ATGGGGTGAT GTGAACCACC GCATGGTCTG GTTCGGGCGT GAGGTATGCG AAGCGCGCAA GCCCCTGTGC GGCCAGTGCG AAATGGCGAT CTTCTGCCCC AGGCTGGAGC CGCCCAAAAC ACCGCGCCCG GCCCGACGCA AGGTTCCGCC GGCCTAG
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Protein sequence | MSAKNSRPAR AQKVLAALRT RYPAPHTHLD AETAWQLLVA TVLAAQCTDA RVNTVTPELF RRWPGPADLM GVPVEELEAV IRSTGFYRSK AKNLLGAAAR VCEVYDGRIP NSLEELITLP GVARKTANVV LFGAFGINEG LAVDTHVKRI SYRLGLTEST DPVVIERDLM ALFPREEWGD VNHRMVWFGR EVCEARKPLC GQCEMAIFCP RLEPPKTPRP ARRKVPPA
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