Gene Ddes_0178 details

Gene Information

• Locus tag: Ddes_0178
• ID: 7283832
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
• Kingdom: Bacteria
• Replicon accession: NC_011883
• Strand: -
• Start bp: 222806
• End bp: 224845
• Gene Length: 2040 bp
• Protein Length: 679 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643580964
• Product: Sel1 domain protein repeat-containing protein
• Protein accession: YP_002478774
• Protein GI: 220903462
• COG category: [R] General function prediction only
• COG ID: [COG0790] FOG: TPR repeat, SEL1 subfamily

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCCGGG ACAAACTCCA CGACATAACG GCACCCACAG GCTCTGCAAG GTGCAAAAAC 
AGTCCCCGCA AGGTCACCAT GCCCGTATTG TGGGGGCTTG CCCCTGATGG ATTTCTTTCC 
GCAGCCCTGC GCACTTTCAA AACCCGTCTT TTTGCCTTGC GCGCGCGTTG CCTGCATGTC 
CTGCCCCTGT GCGCCCTGAT CCTGTGCGCC CTGCCACCGG GCGCCCCGGG TACGCACCTT 
GCCGCCGCAT ACGTATGGGG ACCACGCCCG GCCCTGGCGG CGGCCGCCTC CATCCCCACG 
CCCACACCTG CCGAGCCTAG AGTGCATGAA CCTGTTGTAC CCGTTCCCAC GGTCACTGTA 
CCGACAGTTC AGGCTCCGGT GGTTCAGGCT CCGCAGCTCC AGCCCTCCGG CGGGCAGCAA 
AGGCCCGGAT GGAGCGGATC GAGCGGGCGG AGCGGCAATG CCGGGCAAGC CGCAAGCCTG 
CAGGACGCCG GAAATGATGG CCGGCAAGTC TCCCCCACCC GCGAAATTAT GGGCTTTCTC 
TTTGGCGGCA ACACAGGCAC GGCTTCAGAT AACGCAACGG CTGCCCCGCA GGACACTGCA 
AGCCATCCCT CAACGTCCAT ACGCAACGGC AGCCTGAACA GCACAGGTCC CAATGGCGCC 
CCCATGCCTC CAGGCCCGAT TGCCGTGCCG CTGCCGGCTC CTGTAGCGCC ACCGGCTCCC 
GTGGCCCCTG TGGCCCCTGC CCCGGTTCCG GCCACACCCG GCAATCGTGT TCCGGCCCGG 
GCCGTGGCCG AAATGCAGCC ACAGTCGCCT GAAGCGCAAT TGCGCCAGAA GCAGCAAAAT 
GCAGAAAGGG AACGTCAGCG GCAGGAAAAG GCACGTCGCA GTTCCCGGCC CGCCAAGGCT 
ACGGAAACTG CCGGTCCGGA GGCCTCCCGC CCGGCGGCAG ACCATGCCGG TACGCCGACT 
TCCGTACCGC CCCCGGCCGC AAAGGAAGAA AACACGCCCC CGGATGTGCC GGAAACCCCA 
AAAGCGGAAA GCCCCTTTAC ACCCGGCAGC CCCGAAGCAC AGGCCAATGA GGCCTACCAG 
AAAGGTGATT TTGCCCAGGC GCGGGCCATC TGGCAGCACC TTGCGGATGG CGGCGACGGG 
CAGTCCATGA ACAATCTGGG CGTGCTTTAT GATCTCGGTC TGGGGGTAGA GCCTGACGAA 
GGGCGCGCCC TGCACTGGTT TGCCCAGTCT GCGGCAGCGG GGCATCCCTC AGGCATGAGC 
AATTACGGCC GCATGCTGGA ACAGGGACGT GGCATTGAAG CCAACCCCCA CGAGGCTGCC 
CGCTGGTTTG ACCTCGCGGC CCGACAGGGC CAGCCCGAAG CCCAGTACAA TCTGGGACTT 
ATGTATGAAA GCGGTCACGG CGTATCCCGC GACTACAAGG CCGCCGCCGC ATGGTACAGC 
CGCGCAGCAG CCCAGCAGCA AATAGACGCG CTCGCCCGGC TGGGCCATCT CTATCGCGCC 
GGAGAGGGTG TGGAAAAGAA TGCGGCACGA GCCACGCTTT TACTCTATGC GGCAGCCATG 
CGCGGCTCTG TTCATGCCAT GAAAGAGCTG GAGGCCATGG CCGAAGCCTC CGGAGTACGC 
CACGGAGCCG TGCTTTTCGG GCAACGGCTG GATACGGCCA ACCGCACGGC CATGCGCGAC 
ACGCTTTCCA GGGCCGGCAT GCAGCCGTCC CGGCAGGACG ATGCCTATAT CTGCGACCTG 
TATATCCCCG GCGCCCTTGT ACCCGGCGCA CGGCAAATGG CTCTTTGCTA CGGCCCGGGC 
AGGCCCGCGC CTCTGGGCTT TGTAGAACTG GAATATGCCG CCCCCCACAA GGACACCGCC 
CAGAGCATCA TGCGCATGGT CAGTGAGCGC TTCGGGCCGC CATCCGCCGG AGAAGGGGAC 
GACGGACACA TCTGGAATCT CGGTACGGTC ATCGTGGCCA CGCGCTACAA CCCCGCGCAA 
CAGACGGTCA GCCTCATGTA TATGGTTCCC GCCATCTACC ACCTGACACG CCAGGACTAG 

 

Protein sequence

MRRDKLHDIT APTGSARCKN SPRKVTMPVL WGLAPDGFLS AALRTFKTRL FALRARCLHV 
LPLCALILCA LPPGAPGTHL AAAYVWGPRP ALAAAASIPT PTPAEPRVHE PVVPVPTVTV 
PTVQAPVVQA PQLQPSGGQQ RPGWSGSSGR SGNAGQAASL QDAGNDGRQV SPTREIMGFL 
FGGNTGTASD NATAAPQDTA SHPSTSIRNG SLNSTGPNGA PMPPGPIAVP LPAPVAPPAP 
VAPVAPAPVP ATPGNRVPAR AVAEMQPQSP EAQLRQKQQN AERERQRQEK ARRSSRPAKA 
TETAGPEASR PAADHAGTPT SVPPPAAKEE NTPPDVPETP KAESPFTPGS PEAQANEAYQ 
KGDFAQARAI WQHLADGGDG QSMNNLGVLY DLGLGVEPDE GRALHWFAQS AAAGHPSGMS 
NYGRMLEQGR GIEANPHEAA RWFDLAARQG QPEAQYNLGL MYESGHGVSR DYKAAAAWYS 
RAAAQQQIDA LARLGHLYRA GEGVEKNAAR ATLLLYAAAM RGSVHAMKEL EAMAEASGVR 
HGAVLFGQRL DTANRTAMRD TLSRAGMQPS RQDDAYICDL YIPGALVPGA RQMALCYGPG 
RPAPLGFVEL EYAAPHKDTA QSIMRMVSER FGPPSAGEGD DGHIWNLGTV IVATRYNPAQ 
QTVSLMYMVP AIYHLTRQD