Gene Ddes_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0163 
Symbol 
ID7283817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp202189 
End bp203079 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content64% 
IMG OID643580951 
Productrod shape-determining protein MreC 
Protein accessionYP_002478761 
Protein GI220903449 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCTGC GGCGCATTAT TATTCTTGCG GGCATACTGC TCATCCTCTT TCTGGCCATG 
TACTCATGGA ACCAGCGCAC GCGCGCGCTG GACAACCTGG CCGCTGAAGT GGGGCTGGAG
CTGGCCGGAG CCGTGCTCAA ACCCCTGCGC GCCGTCCAGG ACTCGGCCCA GGACATGTGG
GACCGCTACT TCGACCTTGT GGCCGTGCGC GAAGAAAACG AAATACTCCG GCAGCGCGTT
GATGAAATGG AAGCCCGGCT GCTGGCCAAC GGCGAAGACA TGGCCGAGCT CAAGCGTCTG
CGCGCCCTCA TACAGCTTCC GGTGGACCAG AGCTGGCGGC CCCTGGGTGC GCGTGTGCTT
TCCGGCCGCA TGGGCCCCAA TGCCGTTCTC GACAGTGTGA CCATCAGCCG GGGCTACAGC
ACAGGCGGCA GGCCCGGTAC CCCCCTTGTG ACCCACCTTG GCCTTGTGGG CCGCGTACTC
AAGGCCAGCG CCCACAGCGC CATCGCCCTG CTGCTCACAG ATCCCGGCAG CCGCATTGCC
GTATTTTCGC AAGAAAGCCG CGCCCCCGGC ATCCTGGCCG GACAGGGAAC CGGGCAGCCC
CTTGAAGTCA ATTTCGTACA GCGCGCAACC AGGGTAAACG AGGGCGAAAT CCTCATTACT
TCTGGCCTGG ACGGCAAATA TCCCAAGGGT ATACCTGTTG CCCGGGTGCT CAGCGTGGCG
CCGTCGGACT ATACCCAGTT CATGGCTATC AAGGCCGAAC CTCTGGTGGA TCTGCACCAT
CTTGAAGAAG TGCTGCTGCT TGAACCCACC GGAGTGGCCC CACCCCCGGA CCTGGGCGCG
CCGCCCAAAG AAATTCACGG GCCGCCCACG CCCGGACGCC CCGCCCCATG A
 
Protein sequence
MTLRRIIILA GILLILFLAM YSWNQRTRAL DNLAAEVGLE LAGAVLKPLR AVQDSAQDMW 
DRYFDLVAVR EENEILRQRV DEMEARLLAN GEDMAELKRL RALIQLPVDQ SWRPLGARVL
SGRMGPNAVL DSVTISRGYS TGGRPGTPLV THLGLVGRVL KASAHSAIAL LLTDPGSRIA
VFSQESRAPG ILAGQGTGQP LEVNFVQRAT RVNEGEILIT SGLDGKYPKG IPVARVLSVA
PSDYTQFMAI KAEPLVDLHH LEEVLLLEPT GVAPPPDLGA PPKEIHGPPT PGRPAP