Gene Ddes_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0141 
Symbol 
ID7283795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp179099 
End bp180352 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content64% 
IMG OID643580929 
Productphosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 
Protein accessionYP_002478739 
Protein GI220903427 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACC AGAAACGCGG ATTTAAAACG CCCTTTGACC ACAGCACGCG CTTTGCGCAA 
AAGCGCCTGC ATCTTGGCGT GTGCGGTTCC GTGGCCTGCT ACCGGGCTGC GGATCTTTTG
CGGGCATGGC GCGGCATGGG TATGCATGTT TCGGCCACGC TCACGCCCGG CGCGCGCCGT
TTTGTGACGC CCATGCTCTT TGAGTCGCTG GGCGCGGCCC CTGTTTATGA AGATATGTTC
AGCCAGGGGC AGGAAATTTT CGCCCACCTT GAGCCGGGCC AGCACGCTCA TGCCATGGTG
GTGGCCCCGG CCTCGGCCGA TGCGCTTTTT CGCCTGGCCC ACGGGGCTGC CGGCGACATG
CTGGCCGCCC AGGCGCTTGC CTTTGACGGC CCCCTTGTCA TTGCCCCGGC CATGAATCCG
CGCATGTGGG CTCATGCGGC CACCAGAGCC AATGTGGCAC TTTTGCGCGA GCGCGGGGCG
CATATTGTGG CCCCGGCCTG CGGTGGTACG GCCTGCGGCG ATGAAGGCGA GGGCAGGCTG
GCTCCCCTGC ATGATATTTT TCTGGCGGCG CTCAAGGCGC TCAGTCCGCA GGATATGGCG
GGCAGGCGGG TGATGGTCAC CCTTGGTCCT ACCCGTGAAG GATGGGACGG CGTGCGCTTC
TGGTCCAATC CTTCCAGCGG GCTTATGGGG GCGGCCCTGG CCGTCTGCGC ATGGCTGCGC
GGCGCGGAGG TGACGGCGGT GTGCGGGCCG GGGGTGCGCG CGCGCATGCC CCAGGGCATT
GCCCGGCGTG ATGTGGTCAG CGCACGGGAT ATGTTTGCTG TGGCCGCGGC CCTGTGGCCG
CAGATGGACG TGGGCATGTT CACCGCTGCT GTGGCGGATT TTTCACCCAG GCCCCTGGGC
GGGCGCAAAT TTAAAAAAGC CGAAGCCCCG CAGGGCTTCA GCCTGGATTT TTTGCCAAAT
CCAGATATTT TACAAAGTCT TGCGGAGCAG CGCGCCCCGG GTCAGAAAAT TCTGGCCTTT
GCCGCTGAAA CCGCGCCGGA TATGAATGCC CTGCTGCCCT TGGCTCACGC CAAGATCACG
CGAAAAAAGG CCGATCTTCT GGCAGCCAAC AGGGTGAACA GCGCAGACAG CGGCTTTGCC
TCGCCCACCA ACAGCATGGT TGTGGTGGAT GCCAACGGCC GTGAAGAAAT CTGGCCCACC
CAGAGCAAGG CCGATGTGGC CTGGGAGTTG TGTTCGTGGC TTTTGCGCAT GTAA
 
Protein sequence
MSDQKRGFKT PFDHSTRFAQ KRLHLGVCGS VACYRAADLL RAWRGMGMHV SATLTPGARR 
FVTPMLFESL GAAPVYEDMF SQGQEIFAHL EPGQHAHAMV VAPASADALF RLAHGAAGDM
LAAQALAFDG PLVIAPAMNP RMWAHAATRA NVALLRERGA HIVAPACGGT ACGDEGEGRL
APLHDIFLAA LKALSPQDMA GRRVMVTLGP TREGWDGVRF WSNPSSGLMG AALAVCAWLR
GAEVTAVCGP GVRARMPQGI ARRDVVSARD MFAVAAALWP QMDVGMFTAA VADFSPRPLG
GRKFKKAEAP QGFSLDFLPN PDILQSLAEQ RAPGQKILAF AAETAPDMNA LLPLAHAKIT
RKKADLLAAN RVNSADSGFA SPTNSMVVVD ANGREEIWPT QSKADVAWEL CSWLLRM