Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0088 |
Symbol | |
ID | 7283740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 115635 |
End bp | 116570 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643580874 |
Product | glutamate racemase |
Protein accession | YP_002478686 |
Protein GI | 220903374 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAA GCTCGCGGCT GCCTGTCGGC CTTTTTGACT CCGGCATGGG CGGCCTCACC GTACTCAAGG CCCTGAACCA TCGTCTGCCC GGCGAGGATC TGCTCTACCT TGGCGATACC GCCCGCCTGC CCTATGGAAC CAAAGGGCCT GACACCATCG TGCGCTATAC ACTCAAGGCC GCGCAAAAGC TGGTGGATAT GGGCGTAAAA ATGCTGGTGG TAGCCTGCAA TACGGCCACA GCCGCCGCCC TGCCGGCCCT GCGCCAACAC TTTGCCCCCC TGCCCGTTCT GGGCGTGGTG GAGCCGGGGG CGCAGGCAGC GGCCCAGGCC AGCCGCAACG GGCATATAGT GGTACTGGGT ACAGAAGCCA CCATCAACGG CGGCGCATAT CAGCAGGCCA TAGCGCGCAT CCGGCCCGAA GCCGTGGTGC TGGGACGCGC CTGCAATCTT TTTGTTCCCC TGGCCGAAGA AGGATGGATG GACGGCCCGC TGGTGGAAGG CGTGGCCCGG CGCTATCTGG AAGGTTTTTT CTGCGCCCCT GATACCAACG GTGCAAACGG CAGCAACGAT GCTGCAAGCA CTGCACAGCC CCGTGCGGCC GCCGGAGCGG CGAACGCGCC GGTACAGCCG GACACCCTGC TGCTTGGCTG CACCCATTAC CCCCTGCTGC AAGGAGCCTT GCGGCATGTG GTGGGTCCGG ATGTACGCAT TGTGGACTCT GCCGCCATTA CAGCCCAGGT GGTGGCTGGC GAACTGGCCC GGCTGGAGAT GCTTCACCCC GATACCCGGG AAGGCACAGG CGCCGCAGGC ATGTCGTGCC GCACCGGGCA AAGCCGCTTT CTGACCACAG ACCATGTGGC CCGCTTTATC CGCACAGGCA GCCTTTTTCT GGGCCGTAAA ATGGCCGAAA ACGAGGTTAC GCTGGTCGAC TTGTAG
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Protein sequence | MNQSSRLPVG LFDSGMGGLT VLKALNHRLP GEDLLYLGDT ARLPYGTKGP DTIVRYTLKA AQKLVDMGVK MLVVACNTAT AAALPALRQH FAPLPVLGVV EPGAQAAAQA SRNGHIVVLG TEATINGGAY QQAIARIRPE AVVLGRACNL FVPLAEEGWM DGPLVEGVAR RYLEGFFCAP DTNGANGSND AASTAQPRAA AGAANAPVQP DTLLLGCTHY PLLQGALRHV VGPDVRIVDS AAITAQVVAG ELARLEMLHP DTREGTGAAG MSCRTGQSRF LTTDHVARFI RTGSLFLGRK MAENEVTLVD L
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