| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0054 |
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| Symbol | |
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| ID | 7283705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 70353 |
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| End bp | 72584 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643580839 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_002478652 |
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| Protein GI | 220903340 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAAG ATATCTTCAC CCCCACCCGC GTCACCTGCC AGGTGGGCGG CAAGGAAATC
ATCATCGAAA GCGGCCGCAT GGCCAATCAG GCCCACGGCG AAGTGTGGAT TCAGTGCGGC
GGCACCGTGG TGCTTGTCAC CGTCTGCTCC CAGCCGCTTG AATTCGACAA GGGCTTCTTT
CCCCTTACCG TTGAATACTC TGAAAAAATG TACGCCGCCG GACGCATTCC CGGCAGCTTT
TTCCGCCGCG AAATCGGCCG CCCGTCCGAG CGCGAAACCC TGGTTGCGCG CCTTATCGAC
CGCCCCATCC GCCCGCTTTT CCCCAAGGGG TTGAACGAGG ACGTGCAGGT GCTGGCCAGC
GTTATTTCTG CTGACCAGGA AAACGAGTCC GACGTGCTGG CCCTCACCGG CGCTTCGGCG
GCCCTCATGC TTTCGCCCCT GCCCTTTGAA GGCCCTGTGG CCGGTGGCCG CATTGCCCGC
GTGGGCGGTC AGTTTGTGCT CAACCCCACC TTTGAGCAGC AGGCCCAGAG CGACCTCAAT
ATCGTCTTTG CCGCCTCCGG CGACGCCCTC ACCATGGTGG AAGGCGACGC CCGCTTTATT
TCCGAAGATG TTATCATCGA GGCTCTTGAA TGGGGTCGCC TGCAGATTCT GCCCCTGGTG
GAAATCCAGC ACAAGCTGCG TGAACTTTGC GGCAAGCCCA AGATGAACTT CACGCCCCAC
CAGGACGATG AAGCCCTCGT GGCCTGCGTG CACGAGCTGG CCCTTGCCAA CGGCATGGAA
GAAGCCCTGC GCGTGCCCGA AAAAATGGCC CGCAAAGACG CGCGCAAAGC CGTGAAAGAC
AAGGTCATGG AAACCCTCAA GGCCGACCCG GCCTGGGCCG AAAACGAAGC TGCCCTCAAG
GCCGTGTCCG ACATCCTGGG CGGGCTTGAA AAGAAGCTCG TGCGTGCGCG CATTGTCAAC
GAAGGCACGC GCATTGACGG CCGCGACACA ACCACCGTCC GGCCCATCCA GATCCAGACC
GGCCTTCTGC CCCGCGCCCA CGGCTCTGCC CTGTTCCGCC GCGGCGAAAC CAAGTCTCTT
GTGGTCGCCA CCCTTGGCTC CTCCACAGAC GAGCAGCGCA TGGACTCCCT CACCGGCGAT
GTCACCAAAC GGTTTATGCT GCACTACAAC TTTCCGCCCT TCTCTGTGGG CGAAGTGAAG
CCCGTGCGCG TGTCCCGCCG CGAAATCGGC CACGGCGCCC TGGCGGAAAA GTCCCTGCGC
CCCGTGCTGC CCGCTGACGC CGACTTTCCC TTCACCCTGC GCGTGGTGGC CGAAACGATG
GAATCCAACG GTTCTTCGTC CATGGCTGCC GTGTGCGGTG GTTCGCTCTC CCTCATGGAC
GCCGGCGTGC CTGTGAGCGC CCCGGTGGCC GGTGTGGCCA TGGGCCTCAT CAAGGAAGGC
GAAAAGTTCA TCGTTCTTAC CGATATTCTG GGTGATGAAG ACGCCCTGGG CGATATGGAC
TTCAAGATTG CCGGTACTGC TGAAGGCGTC ACCGGCGTGC AGATGGACAT CAAGATCACG
GGCCTTACCA CCGAGATCAT GCGCACCGCC ATGCAGCAGG CCCGCGAAGG CCGCCTGCAT
ATCCTTGAAG AAATGGCCAA GGCCATCGCC TCGCCGCGCA AGGAACTTTC GCGCTACGCC
CCGCAGCATG CCGAAGTGTT CGTCAACCCT GACATCATCC GCCTGATCAT TGGTCCCGGC
GGCAAGAACA TCAAGGCCAT CACCGCGGCC ACCGGCGCCT CTGTGGACAT TGAAGACTCG
GGCCGCGTGT CCATCTTCGC CCCCACGGCC GAAGCTCTGG AAAAAGCCCG CGAAATGGTT
TCCTACTACG ACCAGCGCCC CGATCTTGGC AAAAACTACA ATGCCAAGGT GCGCAAAATC
ATGGAAATCG GCGCCATTGT CGAAGTGCTG CCCAACGTGG AAGCCCTTGT GCACGTGTCG
CAGCTTGACG TGAACCGCGT GGAGCAACCC GGCGACGTGG CGCGCCTGGG CGAAGACATG
CTGGTCAAGG TCATCGAAAT CAACGGCGAC CGCATCCGCG CCAGCCGCAA GGCGGTGCTG
CTGGAAGAAC AGGGCCATCC CTGGAATCCT GAAGACACCG CCCGCCCGCA GCGCTCCGAC
AGGGGTGACC GTGGTGACAG GCGCGGCGAC CGCGGCGGAC GTGACCGCCG TGATCGTGGT
GACAGGCGCT AG
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| Protein sequence | MSQDIFTPTR VTCQVGGKEI IIESGRMANQ AHGEVWIQCG GTVVLVTVCS QPLEFDKGFF
PLTVEYSEKM YAAGRIPGSF FRREIGRPSE RETLVARLID RPIRPLFPKG LNEDVQVLAS
VISADQENES DVLALTGASA ALMLSPLPFE GPVAGGRIAR VGGQFVLNPT FEQQAQSDLN
IVFAASGDAL TMVEGDARFI SEDVIIEALE WGRLQILPLV EIQHKLRELC GKPKMNFTPH
QDDEALVACV HELALANGME EALRVPEKMA RKDARKAVKD KVMETLKADP AWAENEAALK
AVSDILGGLE KKLVRARIVN EGTRIDGRDT TTVRPIQIQT GLLPRAHGSA LFRRGETKSL
VVATLGSSTD EQRMDSLTGD VTKRFMLHYN FPPFSVGEVK PVRVSRREIG HGALAEKSLR
PVLPADADFP FTLRVVAETM ESNGSSSMAA VCGGSLSLMD AGVPVSAPVA GVAMGLIKEG
EKFIVLTDIL GDEDALGDMD FKIAGTAEGV TGVQMDIKIT GLTTEIMRTA MQQAREGRLH
ILEEMAKAIA SPRKELSRYA PQHAEVFVNP DIIRLIIGPG GKNIKAITAA TGASVDIEDS
GRVSIFAPTA EALEKAREMV SYYDQRPDLG KNYNAKVRKI MEIGAIVEVL PNVEALVHVS
QLDVNRVEQP GDVARLGEDM LVKVIEINGD RIRASRKAVL LEEQGHPWNP EDTARPQRSD
RGDRGDRRGD RGGRDRRDRG DRR
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