Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0045 |
Symbol | |
ID | 7283696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 59454 |
End bp | 60860 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643580830 |
Product | glutamate decarboxylase |
Protein accession | YP_002478643 |
Protein GI | 220903331 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGCGA AAAACACCTT GCGCAATACG GTACTTGATG ACACCTATGC CGCGTCGGAT ATGGCAAATG CCATGCCGCG CCATGAGATG CCCCAACAGG AAAGCCGCCC CCGCGACGTA TACCAGGCCA TTCATGATGA GCTTATGCTG GACGGCAATT CTCGCCAGAA CCTGGCGACG TTCTGCCAGA CCTGGGTAGA CCCCGAGATC AACCAGATCA TGGCCGAGTG CGTTGACAAA AACATGATCG ACAAGGACGA ATACCCGCAG ACTGCCGAAA CAGAAACACG CTGCGTGCAC ATGCTGGCCG ACCTGTGGCA TTCGCCGGAC CCCAAGGGAA CCCTAGGCTG CTCCACCACC GGTTCCAGCG AAGCCGCCAT GCTTGGCGGG CTTGCCATGA AGCGCCGCTG GGTCAACATG CGCAAGGCCG CCGGAAAGCC CTATGACAAA CCCAACATGG TGTGCGGCCC CGTGCAGGTC TGCTGGGAAA AATTCGCCCG CTACTGGGAC GTGGAACTGC GCGAAATTCC TATGGAAAAA GACCGCCTGA TCATGACCGC CGAAGAGGTC ATCAAGCGTT GCGATGAAAA TACCATCGGC GTTGTGCCCA CCCTTGGCGT GACCTTTACC GGCCAGTATG AGCCGGTGGA AGAAGTAAGC AAAGCCCTCG ACAAACTGCA GAAGGACAAG GGCTGGGACA TTCCCATTCA TGTGGACGGC GCCAGCGGCG GCTTTCTTGC CCCGTTCATC GAGCCGGACC TGCTCTGGGA TTTCCGCCTG CCCCGCGTCA AGTCCATCAA CTCTTCCGGT CACAAATTCG GCCTTGCCCC GCTTGGCGTG GGCTGGGTAG TGTGGCGCGA AAAAAGCGAC CTGCCCGAAG ACCTGATTTT CAATGTGAAC TACCTGGGCG GCAACATGCC CACCTTTGCG CTCAACTTCT CCCGCCCCGG CGGCCAGATC ATCGCCCAGT ACTACAACTT CCTGCGTCTG GGACGCGAAG GCTACCGCCG CATTCACCAG AACTGCTACG ATACGGCCCG CTTCCTGGGC GACGAAATCG CCAAGCTCGG TCCCTTTGAA GTGCTGTACA ACGGGCGCGG CGGCATCCCG GCCCTGTGCT GGACCTTCAA GGCCAATGCC AAGACCAGCT ACAGCCTCTA TGACCTCTCG GACCGTCTGC GCTCGCGCGG CTGGCAGGTG CCTGCCTACT CCATGCCCGC TCACCGCGAA GACCTCGTGG TCATGCGCGT ACTGGTACGC CACGGCTTCA GCCGTGACCT CGGCTCCCTG CTTGTCGATG ACCTCAAGCG GGCCATGGCC CACTTTGATG CACACCCCGT CAGCAAACCC CTGAGCGAAA CCGAAGCCGG CAGCAACAGC CACGCCGGAC GCGCTGCAAA AAAATAA
|
Protein sequence | MTAKNTLRNT VLDDTYAASD MANAMPRHEM PQQESRPRDV YQAIHDELML DGNSRQNLAT FCQTWVDPEI NQIMAECVDK NMIDKDEYPQ TAETETRCVH MLADLWHSPD PKGTLGCSTT GSSEAAMLGG LAMKRRWVNM RKAAGKPYDK PNMVCGPVQV CWEKFARYWD VELREIPMEK DRLIMTAEEV IKRCDENTIG VVPTLGVTFT GQYEPVEEVS KALDKLQKDK GWDIPIHVDG ASGGFLAPFI EPDLLWDFRL PRVKSINSSG HKFGLAPLGV GWVVWREKSD LPEDLIFNVN YLGGNMPTFA LNFSRPGGQI IAQYYNFLRL GREGYRRIHQ NCYDTARFLG DEIAKLGPFE VLYNGRGGIP ALCWTFKANA KTSYSLYDLS DRLRSRGWQV PAYSMPAHRE DLVVMRVLVR HGFSRDLGSL LVDDLKRAMA HFDAHPVSKP LSETEAGSNS HAGRAAKK
|
| |