Gene Ddes_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0006 
Symbol 
ID7283657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp7987 
End bp10554 
Gene Length2568 bp 
Protein Length855 aa 
Translation table11 
GC content59% 
IMG OID643580791 
ProductDNA gyrase, A subunit 
Protein accessionYP_002478604 
Protein GI220903292 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGAAA TGCAGCAGCC GCAGATAAGC ATAGAAACTG AACTCCGCAA GTCGTACCTG 
GAGTATTCCC TTTCGGTCAT CATCGGCCGC GCCATTCCTG ACGCCCGTGA CGGTCTCAAG
CCCGTTCACA GGCGCATCAT GTTTGCGCAG TACGAGCTTG CCAACAACTA TAACCGTCCG
CACAAAAAGT CCGCCCGCAT CGTCGGTGAC GTGATCGGTA AATATCACCC GCACGGCGAC
TCGGCTGTGT ATGATGCCCT GGTGCGTCTG GCGCAGGATT TTTCCATGCG CGACCCCCTG
GTGGACGGGC AGGGAAACTT CGGCTCCATC GACGGTGACG CCCCGGCGGC AATGCGTTAC
ACCGAAGTAC GCATGTCCAG GCTGGCCCAG GAATTTCTGG GCGATCTGGA CAAGAACACG
GTGGATTTTC GCCCCAACTA CGACAATACC TTGCAGGAAC CCACGGTTAT GCCCAGCAAG
GTTCCCAACC TGCTGCTCAA CGGCAGCTCG GGTATTGCCG TGGGCATGGC CACCAATATT
CCGCCCCATA ATCTTGGCGA ACTGTGCGAT GCCCTGCAAC TGCTTCTGGA TGATCCCCAG
TGCAGCATTG ATGACCTTAT GGAGCATGTG AAAGGCCCGG ACTTCCCCAC CAGCGGCTAT
GTTTACGCGG GCAAGGGGCT GTACGACGCC TACCACACCG GACGCGGCAC GGTGAAAGTG
CGCGGCCGCA TGGAAATCGA AGACCGCAAG AAAAGCGCAC AGTCCATCGT CATCAGGGAA
ATCCCCTATG GGCTGAACAA GTCTTCTCTG GTAGAAAAGA TCGCGGCTCT GGTCAATGAC
CGCAAGATTG ACGGCATTAC CGACCTGCGT GACGAATCCG ACCGCAGGGG CATCCGCGTG
GTCATCGATC TCAAGCGGGG AACCATTCCC GAGATCGTCA TCAACGCGCT TTACAAATTC
ACGCCGCTGG AATCGAGCTT CGGCATCAAT ATGCTGGCCG TGGTGGACAA CCGTCCGCAG
CTTTTGAACC TTAAAAGCGC GCTTACCTGC TTTGTGGACC ACAGGCGTGA GGTGGTTATC
CGCCGCACCC GCTATGATCT TGAAAAAGCC GAGGCCCGCG CCCATATTCT TGAAGGCCTG
CGCGTTGCCA TCGACAATAT TGATGAAGTT GTGGCTCTTA TCCGTGCTTC GGCCAGCCCG
GACGAAGCGC GCGCTGCCCT CATGAAGCGC TTTGAGCTTT CCGAACTTCA GGCCAAGGCC
ATTCTTGAAA TGCGTTTGCA GCGTCTTACG GGCCTGCAGC GTGAAGAACT CATGGCCGAG
TACAAGGACC TTCTGCAAAA GATCGAATTC TACCGTTCGA TTCTTGAAAA TACCGAAGTG
CTGCGCGGCG AACTCAAGCG CGAGATACGC GAAATCCGCG AAACGTTCGC CACGCCGCGC
CGCACAGAAG TGCTGCGCGA AGCTCTTACC GACATTGACA TTGAAGACCT CATTCCTGAT
GAAGACGTGG TCATCACCCT GTCGCGTCGC GGCTATATGA AGCGCACCGG GCTTGAAAAC
TACCAGCAGC AGAAGCGTGG GGGCAAGGGT ATCGCCGCCC TGTATACCTC TGACGATGAC
TATGTGCAGG AGTTTTTGAG CACTACCAAC CATCAGTTCC TGTGCCTCTT CACCAACAAG
GGCCGCATGC ACCAGCTCAA GGTGCATCAG GTTCCTGAAG GCAGCCGCAC GGCCAAGGGC
GTACACATCA ACAACCTGCT GCCTCTTGAA GACGGTGAAT GGGTCACAAC CGTGCTTGCC
CTGCGCGAAT TTGCCGAGGA CAAGTACTTC CTCTTTGTGA CCAAGCGCGG CATGGTCAAG
CGCTCTTCGG CCTCTCTGTA CGCCCGTTGC CGCAAGACCG GACTTATGGC CGTGGGCCTG
CGCGAAGACG ACGAGCTTGT GGTGGTGCGC CCCATACGCA ACGACAGTCA TATTGTGCTG
GCTACGGCCG ACGGCATAGC CATACGTTTT TCCTGCAAGG ATGTGCGCCC CATGGGCCGT
GTGGCCACGG GCGTCAAGGG CATTGCCCTG CGCAGGCAGG ACTTTGTGGT GGCCGGGGTC
ATTGTGAAGG AAACGGACCA GACCACCGAA ATCATGTCCA TTTCCGCCAA CGGCTTCGGC
AAGCGTACCA GCATCGAGCT GTATCGCCTG CAATCGCGCG GGGGCAAGGG CATCATCAAC
TTCAAGGTTA CCGGCAAGAC CGGGCCTGTG GTGGGCGCCA TGCCCGTGCG TGATGATGAC
AGCCTGATCC TGCTCACTTC GGCCAACAAG ATTGTGCGCA TAGGTCTGGA TGAAGTACGC
AGCAAGGGCC GCGCCACAAT GGGCGTGATG CTCGTGCGCC TGGACGAGGG CGCGCATGTG
GTGGGCTTTG ACCGCGTGGA TGAAGGCGGC CAGACCGGCC GTGACCTGAG CGAAGATATG
GACGAGGACG CCGTGCCGGA AGGCAGCGCG CCCGCGGCTC AGGACGCGCC CTCTTCCGCC
CCTGCAGACA GGGGGGCAGG TGAAGGCGGG ACAGGCGAAG ACGCCTGA
 
Protein sequence
MAEMQQPQIS IETELRKSYL EYSLSVIIGR AIPDARDGLK PVHRRIMFAQ YELANNYNRP 
HKKSARIVGD VIGKYHPHGD SAVYDALVRL AQDFSMRDPL VDGQGNFGSI DGDAPAAMRY
TEVRMSRLAQ EFLGDLDKNT VDFRPNYDNT LQEPTVMPSK VPNLLLNGSS GIAVGMATNI
PPHNLGELCD ALQLLLDDPQ CSIDDLMEHV KGPDFPTSGY VYAGKGLYDA YHTGRGTVKV
RGRMEIEDRK KSAQSIVIRE IPYGLNKSSL VEKIAALVND RKIDGITDLR DESDRRGIRV
VIDLKRGTIP EIVINALYKF TPLESSFGIN MLAVVDNRPQ LLNLKSALTC FVDHRREVVI
RRTRYDLEKA EARAHILEGL RVAIDNIDEV VALIRASASP DEARAALMKR FELSELQAKA
ILEMRLQRLT GLQREELMAE YKDLLQKIEF YRSILENTEV LRGELKREIR EIRETFATPR
RTEVLREALT DIDIEDLIPD EDVVITLSRR GYMKRTGLEN YQQQKRGGKG IAALYTSDDD
YVQEFLSTTN HQFLCLFTNK GRMHQLKVHQ VPEGSRTAKG VHINNLLPLE DGEWVTTVLA
LREFAEDKYF LFVTKRGMVK RSSASLYARC RKTGLMAVGL REDDELVVVR PIRNDSHIVL
ATADGIAIRF SCKDVRPMGR VATGVKGIAL RRQDFVVAGV IVKETDQTTE IMSISANGFG
KRTSIELYRL QSRGGKGIIN FKVTGKTGPV VGAMPVRDDD SLILLTSANK IVRIGLDEVR
SKGRATMGVM LVRLDEGAHV VGFDRVDEGG QTGRDLSEDM DEDAVPEGSA PAAQDAPSSA
PADRGAGEGG TGEDA