Gene Cyan7425_5451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_5451 
Symbol 
ID7280406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011880 
Strand
Start bp186739 
End bp188382 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content43% 
IMG OID643580590 
Productsignal transduction histidine kinase 
Protein accessionYP_002478403 
Protein GI219883241 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.915879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.94618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAACT GGTTTACTGC TAACCCTTTC ATTCCCCATG GTCACTGTTA TTTATGGCAA 
CCAGCATTAG TGAGTTTACA TCTCCTTTCA GATGCCCTAA TTGCCCTTGC TTACTATTCT
ATTCCTCTAA CATTGCTCTA CTTCATTCGT AAACGCCAAG ATATCCCCTT TCCCCAGATA
TTCTCATTAT TTATAGCTTT TATTATTGCT TGTGGAACAA CCCATCTGAT GGAGATCTGG
ACACTCTGGC ATCCAACTTA CTGGCTGTCT GGGGTCCTTA AGGCAGGAAC AGCTTTTGTC
TCCGTTCTTA CGGCTTTTGA ACTGGTTCCG ATTATTCCTA AGGCTCTAGC CCTTCCAAGT
CCTACTCAAC TCGAACAGTC TAATGCTTTT CTTCAGTCCC AAATTGAGGA ACGGTTACGG
GTTGAAGACG AGCTGAGGCA TTTTCAAAAT GAGCTTGAGC AACGAGTACA AGCACGGACC
GCTGAACTCG TAACCGTTAA TCAGCAACTG CAGAGAGAAA TTGAAGAACG CCGACAGACG
ATGGTCACTC TGCGGGAGAG TGAAGAACGA TTGCGCTTTG CTCTGCTAGC TTCACGGATG
GGAATGTGGG ACTGGAACCT CCAAGGGCAG CAGGTTCAAT GGTCAGATAA CCTTGAAACT
CTATTTGGGC TGGGACCTGG TGAGTTTGAT GGTTCTTATG CCATGTTTAT CAATCGATTA
CATCCTGAGG ACAAAGAGCC AGTGCAAGCA GCTATCAATC ATTCGATCGC CACTGGCCAA
AACTATGATA TTGAATTCCG AACCTTGCTT CCTGATGGCA AAATTCGCTG GCTATTAAGC
CAAGGGAAAG TATTTTATGA CCCCAATGGT CAACCGGCTC GAATGGCAGG TATTAATATT
GATATCACAG AACGTAAATC AATTGAAAAT AACCTCAGAC AACTGACTTT AGAGTTAGAA
GAGCGAGTAC AGGAAAGAAC AGCCGCGCTT GAAGCTTCTT TGCAAGAAAA AGTACTGCTG
CTGCGGGAAA TCCATCATCG TGTCAAAAAT AATCTTCAGA TTGTCTCAAG TCTACTCATG
CTTCAATCAG ACACAATTAC AGACCCTTAT GTCACTAAAG TGTTACAAGA GAGCCAGGAA
CGAATTCAAT CGATCGCCCT TGTTCATGAA CACCTTTATT CATCTCCTAA CCTGTCACAA
ATTGATTTCA GCAGCTATAT CGAGAAATTG GTAAAATCTC TTTTCACAAC GTGGGGTAAT
CCCAACCTCA AATTACATTT TGACTTGGAA TCGACAGTGA TTAACTTAGA AACAGCTTTT
CCCTGTGGAC TGTTAATCAA TGAATTAGTT AGTAATGCTC TGATACATGC TTTTCCAAAC
CAGATCAAAG GAAATATTTG GGTGGTGTTC AGAGCAGCAG CGGCAGGTTT TATTTTAGTA
GTAAAAGATG ATGGGATAGG ACTCCCTGAG CAACTGGATT ACCGTAACAC AGAATCCTTA
GGAATGCAGT TGATCTGTGA TCTATCTCAG CAGTTGAATG GTACCCTATC ATTAATGCCC
TTACAAGAAG ATGACAACTG TGGTCGCAGG GGAACATGCT TCAAGCTGGA TTTTCAAGAG
TTGATTTACC GCAAAAGGCT TTGA
 
Protein sequence
MLNWFTANPF IPHGHCYLWQ PALVSLHLLS DALIALAYYS IPLTLLYFIR KRQDIPFPQI 
FSLFIAFIIA CGTTHLMEIW TLWHPTYWLS GVLKAGTAFV SVLTAFELVP IIPKALALPS
PTQLEQSNAF LQSQIEERLR VEDELRHFQN ELEQRVQART AELVTVNQQL QREIEERRQT
MVTLRESEER LRFALLASRM GMWDWNLQGQ QVQWSDNLET LFGLGPGEFD GSYAMFINRL
HPEDKEPVQA AINHSIATGQ NYDIEFRTLL PDGKIRWLLS QGKVFYDPNG QPARMAGINI
DITERKSIEN NLRQLTLELE ERVQERTAAL EASLQEKVLL LREIHHRVKN NLQIVSSLLM
LQSDTITDPY VTKVLQESQE RIQSIALVHE HLYSSPNLSQ IDFSSYIEKL VKSLFTTWGN
PNLKLHFDLE STVINLETAF PCGLLINELV SNALIHAFPN QIKGNIWVVF RAAAAGFILV
VKDDGIGLPE QLDYRNTESL GMQLICDLSQ QLNGTLSLMP LQEDDNCGRR GTCFKLDFQE
LIYRKRL