Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Achl_4444 |
Symbol | |
ID | 7280012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Arthrobacter chlorophenolicus A6 |
Kingdom | Bacteria |
Replicon accession | NC_011879 |
Strand | + |
Start bp | 384669 |
End bp | 386066 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643580398 |
Product | type II secretion system protein E |
Protein accession | YP_002478212 |
Protein GI | 219883048 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 0.00432597 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCTCG CTGACCGTCT GGACGCCGCC GCCGGCATCA CGCCAAGCCC GGCAGCCGAA CAACCCAAAG CCCCGGCCAC AGCCGCTCCA GTCAAGGAAA CAGCGCCGCC CCCGGACGCC CTCTCAGGCC TGAAACAGCG TGCCGGCAAC GCCCTGTTCG AACGGATCGG CAGCCGCCTG AACGACCCGG CAATGGGCGA AGACGAACTG CTGGCCTACG CGCGCGAGGA ACTTACCCAG ATCGTGGACG CCGAGAGTGT CCCGCTCACC GGGGATGAAA AACAGCGGCT CGTCAGCCAG ATCAGCGACG ACGTCATGGG CTACGGACCC CTGCAGAAAC TCCTGGACGA CGAGAGTGTC TCGGAAATCA TGGTCAACGG ACCGGACCAG ATCTTCGTTG AACAAAACGG AAGGGTCACC GAAAGCGACG CGCGCTTCAA AACCGAAGAC CACCTCCGCC GGGTCATCGA GAAGATTGTC TCCCGCGTCG GGCGCCGCAT TGACGAGTCC TCGCCCATGG TGGACGCACG CCTCGCCGAC GGTTCCCGCG TCAACGCCGT CATCCCGCCG CTGGCCGTCA ACGGATCATC ACTGACCATT CGAAAGTTCG CCGCTGACCC GCTCAAGGCC GCAGACCTGG TCCGTTTCGG GTCCATCTCA CCGGAGATGG CCGAGTTGCT GGATGCCTGC GTCAAAGCCC ACCTGAACAT CATCGTCTCG GGCGGCACGG GGACCGGGAA GACCACCCTG CTGAACGTCC TCTCCTCCTT CATCCCGCCG GGGGAGCGGA TCGTCACTAT CGAGGACGCC GTCGAGCTGC AGCTCCAGCA GAACCACGTT GTGCGCCTGG AAAGCCGCCC CTCCAACGTG GAAGGCAAGG GGGAGATCAC CATCCGGGAC CTGCTCAAGA ACTCGCTCCG TATGCGCCCT GACCGAATCG TCGTGGGCGA GTGCCGCGGC GGGGAGGCCC TGGACATGCT GCAGGCAATG AACACCGGCC ACGACGGCTC CTTGTCCACC ATTCACTCCA ATTCGCCCAG GGACGCGATC TCCAGGATGG AGACCCTGGT GCTGATGGCC GGCATGGACC TGCCCCTGAG GGCTGTCCGC GAACAGATCG CTTCCGCCGT GGATGTCATC GTGCAGCTGA CCCGGCTGCG TGACGGCAGC CGCCGCGTCA CACACGTAAC GGAAGTCCAG GGCATGGAAG GCGACGTGGT CACCCTTCAG GACGCCTTCG TCTTTGACTA CAGCGCAGGC GTCGACGAAG ACGGACGGTT CCTGGGCAAG CCGGTCTCCA CAGGCGTCCG CCCGAAATTC ACGGACAAGT TCAACGACCT GGGCATCAAG CTTTCCCCCT CAGTGTTCGG CGTCCCCAGC ATGGCCGGGA GCCGGTAA
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Protein sequence | MNLADRLDAA AGITPSPAAE QPKAPATAAP VKETAPPPDA LSGLKQRAGN ALFERIGSRL NDPAMGEDEL LAYAREELTQ IVDAESVPLT GDEKQRLVSQ ISDDVMGYGP LQKLLDDESV SEIMVNGPDQ IFVEQNGRVT ESDARFKTED HLRRVIEKIV SRVGRRIDES SPMVDARLAD GSRVNAVIPP LAVNGSSLTI RKFAADPLKA ADLVRFGSIS PEMAELLDAC VKAHLNIIVS GGTGTGKTTL LNVLSSFIPP GERIVTIEDA VELQLQQNHV VRLESRPSNV EGKGEITIRD LLKNSLRMRP DRIVVGECRG GEALDMLQAM NTGHDGSLST IHSNSPRDAI SRMETLVLMA GMDLPLRAVR EQIASAVDVI VQLTRLRDGS RRVTHVTEVQ GMEGDVVTLQ DAFVFDYSAG VDEDGRFLGK PVSTGVRPKF TDKFNDLGIK LSPSVFGVPS MAGSR
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