| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2780 |
|---|
| Symbol | |
|---|
| ID | 7271047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 2906608 |
|---|
| End bp | 2907780 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643571365 |
|---|
| Product | Protein of unknown function DUF650 |
|---|
| Protein accession | YP_002467758 |
|---|
| Protein GI | 219853326 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1602] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.829732 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAG TGCCTGACGG GGGGATGCGG TGTGCGGTCT GCAAGGGGAA GGGGCTCTGC
GGGCTCCCCC GCTGCCCGAT CGTCAGCAGG TTCCATACCC AGGCTGCGCT GACCCCGGTT
TCGTCGTACA TGGGGGCCTC CCCCTCGGTC TTCGTCGGCA GTTACAACTA CCCCGAGGTC
CGGGGCGGGC CGCTGCTGAT CGGGGACTCG GACAAACCGA CTGACTGGAT CAGGGCAGGT
CTCGACATCG AGGAGATCAT CGGCCTCCGA GCGGCCACCA TCAATGCGAA GGCAGCGATC
CCGCGGATGA AAGCGAGCAT GCAGGAGATC GCTCTCTCTT CCCACCCGCT TGATGTCGAG
GTGACCTTTG AACGCCCGGT CTCCTTCGAC CTGAAGTTCG ACGGGGTGCT GACTCCAATC
GGGCGGAGCG GGACCGTCGA GAACCTGGAC GTGATCGACA ACGCCACAGT CCCGCGGGTG
GTCGACCGGG TCACCTCCGA CACTGATCTC GGTGCCACGG ACGGGGTTCA GGAGCTTTAC
ACCTCCTCGA TCGATGTCTA TCAGATCCAG AATATCCTCT CGGCCGGACT GCTCGGCAAA
AAACCGACGG TCGTGCCAAC CAGATGGGCG ATCACCGCCG TCGACGATAT GCTTGGAAAA
GCACAGAAGA AGGAGATCGG TCGGTTCCCC CCGATCGAGG AGGTGCTGGT CTTTGGAGGG
AAGCTCTATG GCAACCAGAT CGCCGTGTTG CTGGCACCGG GTGGGTGGCG GTACGAGATG
GTCGAGCAGT GGCGGAAAAA CAGCCTCTGG GCGGGCACGG CCGACGTGAT CGTGGCCGAC
GGTGAAGGAG AGAAGGCGAA AAAGGGCTAC TCACCGATCG CAGGGGCCTA CTACTCGGCC
CGACTCGCAG TGAACGAGTA TCTAACCGGG ATCAGACGAA CGGCGCAGAT CCTGGTGGTC
AGGTCGGTCT CAGGCGAGTA CTGGGCGCCG CTCGGAACCT GGGTGATCCG TGAGGCGACG
AGAAAGGCGA TGCAGTCACC GCCGGAGCGG TACCAGACGG TGGCCGAGGG AGCCGTAGCC
GTCAGTAGAA TCATCGGTGA CGAGGCTTGG GTCTCGGCGA GCACATTGCT GCCCAGGCTC
AAGACGCAGC GGCGACTGCA GGACTTCTTT TAA
|
|---|
| Protein sequence | MEEVPDGGMR CAVCKGKGLC GLPRCPIVSR FHTQAALTPV SSYMGASPSV FVGSYNYPEV
RGGPLLIGDS DKPTDWIRAG LDIEEIIGLR AATINAKAAI PRMKASMQEI ALSSHPLDVE
VTFERPVSFD LKFDGVLTPI GRSGTVENLD VIDNATVPRV VDRVTSDTDL GATDGVQELY
TSSIDVYQIQ NILSAGLLGK KPTVVPTRWA ITAVDDMLGK AQKKEIGRFP PIEEVLVFGG
KLYGNQIAVL LAPGGWRYEM VEQWRKNSLW AGTADVIVAD GEGEKAKKGY SPIAGAYYSA
RLAVNEYLTG IRRTAQILVV RSVSGEYWAP LGTWVIREAT RKAMQSPPER YQTVAEGAVA
VSRIIGDEAW VSASTLLPRL KTQRRLQDFF
|
|---|
| |