| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2762 |
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| Symbol | |
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| ID | 7270872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2890578 |
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| End bp | 2891840 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643571351 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_002467744 |
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| Protein GI | 219853312 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.735424 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCC TCTCTTCTCT TTGCACCAGC ACCGGTGCCT GTATCAGCGC TCTTCACAGC
CTTGTTGGGA AGGATGTCTA CCTGGAGGAG TATGGGTGCA CCTTCAACCA CGCCGATACC
CTGGCGTTGG TCGAGGTGCT GAAGGCGCAG GGGTGTACGA TCGTCCCCAC ACCTGAGGAG
GCGGATGCCG TGGTGCTGAA CACCTGCACC GTCATCGGCC CGACCGAACG GCTGATGCTC
AGGCAGATGC GTCGGTACAG CGGCCATGAC CTTTATCTGA CCGGGTGTAT GCCGGCCGTG
CAGATGGATG CGATCTGTGA GGTCTGTTCC CCTAAGGTGA TCCCCCCAGA GGAGATCCGG
GCGGCCTATA CCCTTGTGAA CACTACGGTT CCGTCGGCGA TAGGGGTCGT GCAGGTGGGG
CAGGGGTGTG CCGGTCGGTG TTCCTACTGC ATCACCAGAA ATGCCCGCGG GCCGCTCCAG
TCGTTCCAGC CGCCGGATAT CTACAACAGG GTGCAGCAAG CGGTCGATAA CGGGGCTGTC
GAGGTGCAGC TGACCGGTCA GGACCTCTCC TCGTGGGGGC TCGACCTCGG GCGGAGCCTC
CCCGACCTTC TTCGGGGAAT CACGGCGTTT CCGGGTGATT ACCGTCTCAG GCTCGGGATG
ATGAACCCGG CCACGGTTCT CCCTATCTTG GATGATCTGA TTGCAGCCTA CCAGTCGGAC
CGAATCTTCC AGTTCCTTCA CCTCCCGATC CAGTCGGGCT CGGATCGGGT GTTGGCTGCG
ATGAACCGGA GTTACACCGC CTCCGACGTT CAGCAGATCC TAAGAGCGTT TCGTGAGGTC
CATCCTGACC TCACCCTGAT GACCGACCTG ATCGTCGGGT TTCCCGGCGA GACCGATCAG
GACTTTGAAG AGACCCTGCA GATGATCACC GCTCTCTCTC CGAACAAGGT GAACATGACC
AGGTACTCAG GGAGGCCTGG CACTCCCGCA GCCGACCTGC CAGATCTGCA GGACTCGGTG
AAGAAGGATC GGTCACGGGC TGTTAACGAC CATGTTACTA CACTCTACCA CCAGAAGAAC
AGTCGGTGGA TTGGAGAGGA GGTCGGCGTC GTCGTCACCG AGCAGCGCAA GCTAGGCTCG
GTGATCACCC GGGACGAGCG TTATCAGAAC ATCGTCATCC CGGAACCCCT CCCCTTTGGG
ATGAAGTGCA GGGTACAGAT CGAGCAAGAT TGCACCTACT ACTTCATCGG TTCCCTGGTC
TGA
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| Protein sequence | MQRLSSLCTS TGACISALHS LVGKDVYLEE YGCTFNHADT LALVEVLKAQ GCTIVPTPEE
ADAVVLNTCT VIGPTERLML RQMRRYSGHD LYLTGCMPAV QMDAICEVCS PKVIPPEEIR
AAYTLVNTTV PSAIGVVQVG QGCAGRCSYC ITRNARGPLQ SFQPPDIYNR VQQAVDNGAV
EVQLTGQDLS SWGLDLGRSL PDLLRGITAF PGDYRLRLGM MNPATVLPIL DDLIAAYQSD
RIFQFLHLPI QSGSDRVLAA MNRSYTASDV QQILRAFREV HPDLTLMTDL IVGFPGETDQ
DFEETLQMIT ALSPNKVNMT RYSGRPGTPA ADLPDLQDSV KKDRSRAVND HVTTLYHQKN
SRWIGEEVGV VVTEQRKLGS VITRDERYQN IVIPEPLPFG MKCRVQIEQD CTYYFIGSLV
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