Gene Mpal_2754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2754 
Symbol 
ID7270863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2882675 
End bp2883325 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content51% 
IMG OID643571343 
Productprotein of unknown function DUF1211 
Protein accessionYP_002467737 
Protein GI219853305 
COG category[S] Function unknown 
COG ID[COG3548] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.423901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAG AGAATGAGTT CGACAATGAG ATGCACCTCA CCAAGGGGCG GCTTGAAGGA 
CTCTCGGATG GCATCTTTGC ATTCTCGATG ACGCTTCTTG TCCTCGGGGT GGATTTGCCC
GATAAGGCGA CGATTGTTCA GTCCAACGAG TATGCCATCC ATGTTCTCCT ATCGCTCGGT
TCCGACTTCT TCCATTATGT TCTGGCATTC CTGATCCTCG GGGCCATCTG GCTCTCTCAT
CACACCAATT TTCACTTCAT CTGGCATGTC GACAAAATAT TCGTCTGGAT CAACCTGATC
ACCCTGATGT TTGTTGCCCT GTTGCCCTTC TCGACCTCTT TTTCAGGGGA CTTCCCCGGG
GCCTCGCTCG GGGCTATCGT CTTTGATGCT AACCTCTTTG CTATCAGTAT GGGTCTGTTC
TTCCAGTGGC TCTATGCGAC GGCCGGACAT CGTCTCGTAA AACCGACAGT GGAGGCTCTC
TTCATCCGGA GAGTACGCTT TCGTATTTTC ACCATCCCGA TTGTAGCACT CGTTGGTATT
CTCCTCGCCC TCGCTGGGTT CACTTGGAGT TCGGCGGTTT ATATGACCCT ACCACTCATC
AAACTGGGGA TAGGCCGGGT GAGTGTAACT TTGTCTGGTG CAGAAAAATG A
 
Protein sequence
MEEENEFDNE MHLTKGRLEG LSDGIFAFSM TLLVLGVDLP DKATIVQSNE YAIHVLLSLG 
SDFFHYVLAF LILGAIWLSH HTNFHFIWHV DKIFVWINLI TLMFVALLPF STSFSGDFPG
ASLGAIVFDA NLFAISMGLF FQWLYATAGH RLVKPTVEAL FIRRVRFRIF TIPIVALVGI
LLALAGFTWS SAVYMTLPLI KLGIGRVSVT LSGAEK