| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2745 |
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| Symbol | |
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| ID | 7270853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2872644 |
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| End bp | 2873507 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643571336 |
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| Product | Pre-mRNA processing ribonucleoprotein, binding domain protein |
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| Protein accession | YP_002467731 |
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| Protein GI | 219853299 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.843574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCACT ACTGGTTTGG GGATCGTGAG GAAGGGGGAG AGGTCTGTAC CCCTGCGCCG
GCCCGGCTCG AAGATGCACT GGCCAGGCTT GCGACGCTGA GAACGCCGGT CAAGGATTAT
ATCCTCCCCG ACTGGCAGTG GGCGGCCGCG TGCGGATACG TCCAGACCAG GGACGAGTAC
CTGCACCGGC TCCAGGAACT CTGCCTTCTC CTCGCCGAGC AGAAGGTCGC TGTCCAGTAC
CAGGCTAAGG ATGTCGAGCT CCTCCAGATG GTTCGGACCC TCGACCAGAT GGACGAAGTG
ATCAATCTCT TGACCGAACG AGCGGTTGAC TGGTACACCG TCAAACACCC GAAGTTCAGC
AGGAAGTTCA AATCGATGAA CGCCCGAAAA CTCCTTGGAT CGCTCGCCCC GCGGACGAAA
GGGCCGCTCG GCATGGTGAT GGAGGAGATC GAGCGCCTCT CGGTGACCCG GACTGCACTG
ATGCGGGAGG TGTCCTCTCG ATCAGATCTG GTCCTCCCGA ACTGTAGCGC CTTGGTTGGC
GGGCTTGTCG CCGCCCGGCT TCTCTCCACG GCTGGCGGAC TCGAACCCCT GGCTCGGCTA
CCCGGCAGTT CGGTGCAGGT GCTCGGGGCA AAGACGGCTC TCTTCTCTCA TATCCGGTCC
GGCACCCCGT CCCCCAAGCA TGGAATCATA TTCCAGCACC GGCGGGTCCA CAACGCCCCA
CCTTCGGTCA GGGGCCGCGT TTCACGGGTG CTGGCTGCTA AACTGGCCAT CGCGGCCCGT
TTGGACCTGT ACCGGGGCGA ACCTGACCCG ACCTTCATCG ATAAGGCGCA ACAGGCGATC
GATCGGGCCG GGAGAGTCGC ATGA
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| Protein sequence | MQHYWFGDRE EGGEVCTPAP ARLEDALARL ATLRTPVKDY ILPDWQWAAA CGYVQTRDEY
LHRLQELCLL LAEQKVAVQY QAKDVELLQM VRTLDQMDEV INLLTERAVD WYTVKHPKFS
RKFKSMNARK LLGSLAPRTK GPLGMVMEEI ERLSVTRTAL MREVSSRSDL VLPNCSALVG
GLVAARLLST AGGLEPLARL PGSSVQVLGA KTALFSHIRS GTPSPKHGII FQHRRVHNAP
PSVRGRVSRV LAAKLAIAAR LDLYRGEPDP TFIDKAQQAI DRAGRVA
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