| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2733 |
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| Symbol | |
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| ID | 7270841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2863755 |
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| End bp | 2864867 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643571324 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_002467719 |
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| Protein GI | 219853287 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4032] Predicted thiamine-pyrophosphate-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.911419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGAAA CGGACCTGAT CTCCATCCTC TCTGAACAGA AGATCGACCT TGCTGCGACC
CTCCCCTGCG ACCGGACAAA GGATCTCTGC TCACTGCTCA CCGCTCATAT CCCTGAGATC
CCGGTGAACC GGGAGGAGGA CGGGGTCGGT GTCTGCGCCG GTGCTGCCCT TGGGGGTTCC
CGGCCGGCAC TGGTGATCCA GAGTTCTGGC CTCGGTAACT CGCTCAATGC CCTGATGTCA
CTGACGATGA CCTACCGCCT CCCGCTCCCG ATCATCGCCA GCTGGCGCGG GTTTTATCAC
GAGGCGATTC CGGCGCAGGT CCCATTCAAT CGGCCGCTTC CGGCGGTGCT GGATGCGCTT
GGGATCCCGT ACCAGATCAT CAGGGAGGCC GGCGAACTTG GCCTGGTCAA CCAGGTGATC
CAGGAGGCGT TTGAAGATCA TACTCCTTCG GTCGCCCTGA TCTCCCCGAA GGTCTGGGAG
GGGGGTGGCG AATGTGCGAC CTCTGGACCC TTTCCGTCAC GGGGACGAAC CTCAGCGATC
TGCTACCAGC GCAAGATCCG AGAGCCGGTG ATGACCCGGT CGGATGCGAT CGGGGTGATC
AGCGGGGCGC TGACCGACCA GGCGGTCGTG GCCAACATCG GGATGCCGAG CAAGGAACTC
TATGTGCACC ATGACCGTCC GCAAAATTTC TACATGCTCG GCAGTTACAC TCAGGCCACC
CCGGTCGGAT TCGGTCTGGC CTCGGTCACC GATCGGGATG TCTGGGTGAT CGATGGGGAT
GGAAGTATGC TCGGGACAGG GATCCTCCCG GCCGTCGGGG CAGCCCATCC TCCAAACCTC
CGGATTTTCT GCCTGGACAA CGGGGCGTTT GGCTCGACCG GTAACCAGCC GACCTATGCG
GCGACCGGGG TGGACATCGA ACTGATGGCC AGGGCTGCAG GTATCATTTC GACTGTCAAG
GTCCAGGGTC CCGAGGAACT GGCTGCGGTC TGCAGCGATC AGGTTGATGG CCCTCTCTTC
GTCCATGTGC TGATCAGACC GGGAAACACC CAGGTACCGA ACATCCCACT CTCACCGGAA
GCGATCAGGG ATCGGTTCAT CGGAGCTCTC TGA
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| Protein sequence | MHETDLISIL SEQKIDLAAT LPCDRTKDLC SLLTAHIPEI PVNREEDGVG VCAGAALGGS
RPALVIQSSG LGNSLNALMS LTMTYRLPLP IIASWRGFYH EAIPAQVPFN RPLPAVLDAL
GIPYQIIREA GELGLVNQVI QEAFEDHTPS VALISPKVWE GGGECATSGP FPSRGRTSAI
CYQRKIREPV MTRSDAIGVI SGALTDQAVV ANIGMPSKEL YVHHDRPQNF YMLGSYTQAT
PVGFGLASVT DRDVWVIDGD GSMLGTGILP AVGAAHPPNL RIFCLDNGAF GSTGNQPTYA
ATGVDIELMA RAAGIISTVK VQGPEELAAV CSDQVDGPLF VHVLIRPGNT QVPNIPLSPE
AIRDRFIGAL
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