| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2724 |
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| Symbol | |
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| ID | 7270832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2852567 |
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| End bp | 2854426 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643571315 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_002467710 |
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| Protein GI | 219853278 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.481092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.977803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTACG CACTGCCTGA GCACGCACTC AAGCACCTGC TCGTACGCAT CGGAGCGCTG
GTGATCGGCG TTGCCTCGGT CTACCTGGTT GTGACCTCGT TCGCACAGGG CGCTATATTC
TCGACGTTCG CTTCAGAGCC GGCTGGTCAG ATCATGTTCG TGATCGAGAT GCTGATGGCT
CTCTTCATCC TGTACATGGG GGTACGGTAC AAAAATTACC TGGCCGTGGC TCTAATCCTT
ATACAGTCTG CGATGATGAT CTACTTTGAG ACCACCTATG CAGAGCACCT GACAGCGATC
CATAACCTGT TCGTCGACGA TTTCACCCTG ATCATGGCGC TGATCATCGG GATCATCGGG
TCCCTGATCT GTGTCTACTC GATCCGGTAC ATGCAGGTCT TCCATGAACA TCACCCAGAG
GTGACCGACA GAAGAAGGAT GTTTTTCTTC GTCCTCTTCG CATTCCTCTC GGCGATGTTC
GGACTTGTCT TCTCGAACAA CCTCGTCTGG GTCTATTTCT TCTGGGAAGT GACGACGCTC
TGTTCGTTCG TGCTGATCGG ATACACCCAG ACCGAAGAGG CGATAAAAAA CTCGTTCCGG
GCCCTGTGGA TGAACCTCCT TGGTGGTCTC GGGTTCGCTG CAGCGCTCCT ATACCTGGCA
GCCATGCCGG CAGCAGGCGG TATTATCGAG CTCGACCGAC TGGTCGGGGC CGGCCAGGCC
GTGGCCCTGA TCCCGGCGGT GCTGATCTGC TTTGCCGGAC TGACTAAGTC CGCCCAACTG
CCGTTCTCGT CCTGGCTGGT TGGGGCAATG GTCGCACCGA CGCCTGTCTC GGCCCTGCTC
CACTCCTCGA CGATGGTCAA GGCAGGGGTC TATATCATCA TCAAGATGGC CCCGATCCTG
CAGGGTTCCC TTCCAGGGCT GATGCTCGCC CTGGTCGGCG GGTTCACGTT CCTGCTCGCC
TCTGGGATCG CCATCTCCCA GTCCAACGCC AAGAAGGTGC TCGCCTATTC GACGATCGCA
AACCTCGGAC TGGTGGTGGC CTGTGGCGGT ATCGGGACCT ACGAAGCAGT CTGGGCAGCG
ATTCTGTTGA TCATATTCCA TGCGATCTCC AAGTCGCTCC TCTTCCTTTC GGTCGGGACC
GTCGAACACC AGATTGGATC CCGGGACATC GAGGACATGG AGGGGCTGAT CGCCCGGATG
CCACGGGTGG CCACGATGAT GATGGTCGGA ATCGCCGGGA TGTTCCTAGC CCCGTTCGGG
ATGTTGATCA GCAAGTGGGC AACACTCCGT GCGTTCATCG ATGTGCAGTT CGGCCTGATC
CTGGTCGCGA TCGTCGCCTT CGGGTCGGCA GTGACGCTCT TCTTCTGGAC CAAATGGATG
GGCAAACTGA TCGCCGTCCC CACTCCCCAG AAGAACCAGG AGGGGGGCGT CGGCAGAGAG
GAGATCGGAG TACTGTACAC CCTGACGGTG CTGACCGTCG GGGTCTGTCT GCTTTTCCCG
CTCATCTCCT CGGTGCTGAT CGAGCCATAT GTGCTCGCAG CCTATGGAAA GGTCACCCAG
CTTGGACAGG ACAATGTGAT CATCATGCTG TTGATGCTCT TCATGATCCT GCTCCTGCCG
CTCTCGATGC GGTACTACGG AAAGGACCAA CATCACCTAA CTCCATACAT GGGCGGACGA
GCCACCAACG CAGATATGCA GTTTAAGGGG ACATTTGGCG TGTATAAGCC GGCAACCATG
CACAACTACT ACTTGAAGAA CCTTTTTGGT GAGACAAAAC TGATGAAAGT CGGCGTGGTC
CTCTGCACCG GGTTAATCGT GCTAATGGCC GGTGCCGTCT ACACGGGGGT GCTGTTATGA
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| Protein sequence | MMYALPEHAL KHLLVRIGAL VIGVASVYLV VTSFAQGAIF STFASEPAGQ IMFVIEMLMA
LFILYMGVRY KNYLAVALIL IQSAMMIYFE TTYAEHLTAI HNLFVDDFTL IMALIIGIIG
SLICVYSIRY MQVFHEHHPE VTDRRRMFFF VLFAFLSAMF GLVFSNNLVW VYFFWEVTTL
CSFVLIGYTQ TEEAIKNSFR ALWMNLLGGL GFAAALLYLA AMPAAGGIIE LDRLVGAGQA
VALIPAVLIC FAGLTKSAQL PFSSWLVGAM VAPTPVSALL HSSTMVKAGV YIIIKMAPIL
QGSLPGLMLA LVGGFTFLLA SGIAISQSNA KKVLAYSTIA NLGLVVACGG IGTYEAVWAA
ILLIIFHAIS KSLLFLSVGT VEHQIGSRDI EDMEGLIARM PRVATMMMVG IAGMFLAPFG
MLISKWATLR AFIDVQFGLI LVAIVAFGSA VTLFFWTKWM GKLIAVPTPQ KNQEGGVGRE
EIGVLYTLTV LTVGVCLLFP LISSVLIEPY VLAAYGKVTQ LGQDNVIIML LMLFMILLLP
LSMRYYGKDQ HHLTPYMGGR ATNADMQFKG TFGVYKPATM HNYYLKNLFG ETKLMKVGVV
LCTGLIVLMA GAVYTGVLL
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