| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2686 |
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| Symbol | |
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| ID | 7272508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2815268 |
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| End bp | 2817202 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643571277 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002467673 |
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| Protein GI | 219853241 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.473115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTCGT GGCGGTTTGT TCAGGACTGG GTGGCGCGTG ACCCGATCAA ATGGCAGACA
CTGAACACGG ATCTGATCTC AAGCCGTGCC GGGGTGACGG TGGAGCACTA TCTGGTCAAT
GCGATCGGGG GATCGATAGG GGTAGGGATC CTCTTTGCGG TTGTCGGGTT TGTGATCTCC
GGCCTGGTGA TTGCGATGCA GAAGGCCAGC GGAACCACGA TGACCACGCC GATTACCGGC
GTTCACCTGC CGGTTTCGAT CGGTCCGATC CCAATGGGGA TCATCGAGCA GGTGGGTGTC
GGGACCCTGG CCTTCTCGAT CGCCGCCGCC ATCACCTATT TTATCGCCCT TCAGTGGCCC
GGACTCCAGA AAGGGACCCG TTCGACCAAA ATAAACCTGA CCCTCCACAA CGCGGTTGCT
TACATGTATG CAATGCGGAA GGGTGGTGGG GAACTGATGG TGATCTTCCG CTCGATCTCC
GATCATTCCA ACATCTATGG TGAGGTGGCA CTTGAGTTTA GACAGATCGT CAGGGACGCA
GACTTCTTCG GTCTGGACGA GGTCTCGGCG ATTCGGCGGC TGAACCTGAC GACCCCGTCG
ACCAAGTTGA AGGACTTTCT TCAGGATCTC CTCTCGGTGA TCGAGAGTGG CGGGGATATG
GCCACATTCC TCTCGACAAG GGTTCATCTC TTCCAGGAGG AGGCTCGGTT TGAACAGAAA
CAGTTCCTCG GTTTCCTCTC GCTGGTTGCA GAGTCATACG TGACCCTCTT CGTCGCCGGC
CCCCTCTTTC TGATCATCAT CATGGTGGTG ATGGGGATGA TGGGGGGGTC TGCAGTGTTG
CAGCTCTCTA TGGTCACCTA TGTGATGCTC CCGGTCGGGA CTTCCCTCTT CATGGTGATG
ATAGATCTGG TTTCGATCAA GAGCGAGGTG GTCTCCCGGT TCACCCAGAA AAAACTCCTC
CATGAGTTCT CTGATGTTCG GGTCAGGGAG ACGACCGATG AAGAGCCATT CTTCGCAACT
CTGGCCAGGT ACGACAAGTG GCGGCAGGTG AAGGCCTTCC TTTCCAGTCC ATTGCAGGCA
TTTGTGATGA AACCGTCCAG AATCCTCTAC ATCAGTGTCC CGATCGGGAT CATCTATGTA
CTCGTTCACC TGCTGATGGT TCAGGGCGCT CCTGACCTGG AGACTTATCT CGATCTGGTC
GACGACCATA TCGTCATCGC AGTACTGATC ATCCTTGTCC CGTATTCGGT CTTCTTTGAG
GGGTGGAATC GGAAGTTGGG GGGCATCGAA TCCTCGATCC CCGAGTTTCT GGATCGGATG
GCCGGGATCA ACCAGGTCGG ACTGACGATG GCACAGGCGA TCTCCATTAT GGTCAACGCG
AACCTCGGGG TGCTCGGTTA CGAGATCAAG CGGATCAAGC GGGACATGGA GTGGGGGGCT
AACTTCTCTG AGGCGCTGAT GCGGTTTGAA CGGCGGATCA CCACCCCGAT CATCGCGAGA
ATGGTGGTAC TGATCACCAA GGCCAGCGAG ATGAGCGGGC AGATCAACGA GGTGCTGAAC
ATCGCGGCCA GTGATGCCAG GATGTCGGAT GTCCTCAAAA AAGAGCGGCT GGGTGAGATG
TTCATCTATA CGGCTATCGT CTACCTCTCG TTCATGGTTT TCATCTTCGT TGTTGGGGTC
CTCTCCAGCC AGTTTCTGCC GGTGCTCGGC GGAATCCAGC CCGGTTCCGT CTCTCAGGCA
GGGGGTGCCT TCTCTGGCCT TGGCTCGATC CCGATCAAGA CCTTCGACCG GTTGCTCTAC
CATGCATGTT TGCTGCAGGG CTTTTTTTCA GGGTTGATCG CAGGGCAGAT GGGCGAGTCC
TCGATCGGAT CCGGTGTGAA GCATGCCTGT ATCATGGTGA TCATCGCCCT GATCGCGTTC
AACACAGTCG TCTGA
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| Protein sequence | MRSWRFVQDW VARDPIKWQT LNTDLISSRA GVTVEHYLVN AIGGSIGVGI LFAVVGFVIS
GLVIAMQKAS GTTMTTPITG VHLPVSIGPI PMGIIEQVGV GTLAFSIAAA ITYFIALQWP
GLQKGTRSTK INLTLHNAVA YMYAMRKGGG ELMVIFRSIS DHSNIYGEVA LEFRQIVRDA
DFFGLDEVSA IRRLNLTTPS TKLKDFLQDL LSVIESGGDM ATFLSTRVHL FQEEARFEQK
QFLGFLSLVA ESYVTLFVAG PLFLIIIMVV MGMMGGSAVL QLSMVTYVML PVGTSLFMVM
IDLVSIKSEV VSRFTQKKLL HEFSDVRVRE TTDEEPFFAT LARYDKWRQV KAFLSSPLQA
FVMKPSRILY ISVPIGIIYV LVHLLMVQGA PDLETYLDLV DDHIVIAVLI ILVPYSVFFE
GWNRKLGGIE SSIPEFLDRM AGINQVGLTM AQAISIMVNA NLGVLGYEIK RIKRDMEWGA
NFSEALMRFE RRITTPIIAR MVVLITKASE MSGQINEVLN IAASDARMSD VLKKERLGEM
FIYTAIVYLS FMVFIFVVGV LSSQFLPVLG GIQPGSVSQA GGAFSGLGSI PIKTFDRLLY
HACLLQGFFS GLIAGQMGES SIGSGVKHAC IMVIIALIAF NTVV
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