| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2670 |
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| Symbol | |
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| ID | 7272492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2795023 |
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| End bp | 2799186 |
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| Gene Length | 4164 bp |
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| Protein Length | 1387 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643571261 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_002467657 |
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| Protein GI | 219853225 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.195027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTAC CCAAGAGTAA TCCATCAGGC AGACTGTTCC TAGTCTCTCT GATGGTAATC
ATGGCCTGCC TGTTGATTCC AGGGGCGTTC GCCGCCTCGG CAACAGCAGA CCATACCAAT
GATAAAGGAT ACGGAGGCAT AGGGCCGATC GTGAACTTCA CGGTAGACCA CAGCAGCATC
ACTGCCGGTG ATTCAGTTAA GTTCACCGAT ACCTCGTATG ACAACATCAC ATCACAGGCG
TGGGACTTCG GCGATGGCTC GATCTCCCTT GATGCAAATC CAACGCACAC CTATACAGCA
GCTGGGACCT ATGTCGTCGC TCTGAATGTG CAGAATGCAA CTGGATACGC ATCTAACACA
AGTGGAATGA CTGTCAATGG ATACACGCTT CCAAGCATTA CGGTTGCATC TGTTCAAGAT
GTAGCACCGC AGTTCAATAT CGGTCTGAAC GGAAACACCT ATGGTGTCTT CGGAGCGACC
GGGAGTGCGA GCACATTCTC TAACGCAACA GTCAATGTTG GAGACGCCCT GACATTCACC
GATGCCTCTA CCGGTGTTCC AACTACCTGG TCCTGGAACT TTGGTGATGC AAGCGATCTG
ATCACAACCC AGAACGCGAC CCACACCTTC ACTCAGGCCG GTACCTACGT GGTCTATCTG
ACTGCAGGTA ACGTCAATGG TCAGAAAACA TCAAATTCAC TTACAATAGT TGTCAATGGA
GGGATTGCCC CTGTATCAGC GTTCACCGCC TCGAATAATG GCGTTGAGAA CAGTTCAGTA
GCAGGAACAC CAGACTACGC TAATGCCGCT TATCTGAATG GCACTGCACC GATGACAGTT
TCATTCACCG ACAAGTCGAC CAAGGTGCCA TCGTCCTGGT CATGGACCAA AAACGGTACA
GTCTTCTCGA CTGAGCAGAA CCCGTCCCTC ACCTTAAACC AGGGGCAGTA CCAGATCATC
CTGAATGCAA CCAATGCACA GGGCAGCAAC CTGTCCTCGA TCTGGATTAA CGTAGCAGGC
CCATCAACAC CGATTGCACA CTTTGTTGCA ACACCCTCAA CCGGAACCGC ACCACTGTCA
GTTCAGTTCA ACGACACCTC AGATGGTGGC CTTGCTGCTC CGACCAGCTG GCTCTGGAAC
TTCGGTGACG GAACCCAGGG GTCGACCGTC CAGAACGCGA CTCACACCTT TACCGCTGCA
GGCACCTACA CCGTCACTCT GCAGACCAGA AACGGGGCAG GAGTTTCCAC TCCGTTTACA
GGCACGATAA CTGTTAATTC ACCTACAACT CCAAGCGCGA ACTTCAAGAT CAATGGATCC
ACTGCTGACA ATTACGCACA GAACCCTGTG ACCATTCTCG TCGGCCAGCC GGTCTACTTC
AATGATACCT CGTCAGGTTC ACCAAGTTCC TACAACTGGA TCTTCAGCGA CGGACAGCCG
GTGCCGACAC AGGCCAATGT CTCCCGCTCG TTCAGCGTGC CAGGGACCTT CTGGGTCTAC
CACACCGTCA CGAACGCAGC AGGATCGGAC TCTAAGCTGA ACCTCTTCAC TGTCACGGTT
GCTCCAGTAA CTGCAGCACC GGTTGCGAGC TTCACTAAGA ACGCAACAGA TGGCGAAGCA
CCGCTGACCG TCTTATTCAC CAACACCTCA ACCGGAGCAC CAACCACCTT CCAGTGGCTG
ATCAACGGAG TGCAGCAGGG AACCGATGCG AACCTGACCT ACACGTTCGC AACCCCGGGC
ACCTACAGTG TTGTACTGAT CGCATCCAAC GCGGGTGGTT CAAGTGCAGC AGCAGCACAG
ACCGTTACGG TCTCTGGTGT TAGTGGAATT CCAAATGCAA ACTTCACCTT TACATCACCC
AGCTTTGCAG CACCATCTCA GGTTCAGTTC ACCTACGCTG GTGGCAATGC GACCCAGTTC
CTCTGGACCT TTGATGATGG AACCACCTCG ACTGAAATGA ACCCGGTGCA CACCTACCAG
AACGCCGGAA CCTACTCGGT CAGGCTGACC ACAACCAATG CAAAGGGAAC CAACTACAAG
ATCAATGATG TAACCATAAC CCCGCTCGGC AACCCGGTTG CCAGCTTCAA TGCAAACACA
ACTGCAGTTA CCAAAGCCAG TGCTGCATCA GCACAGGTCT CAGGACAGTC ACCGTTCACC
GTCGTGTTCA ATGACACCTC CTCAGAGCGG CCAACTGCAT GGTACTGGAA CCTCGGTGAC
GGCACCACTT CAACCTCACA GAATATCACC CACACCTACA CCACCCCAGG CAAGTACGCA
GTCTACCTCG TGGTGGCCAA CAGCCTCGGT GCATCAGACT ATGTCTACGC CCCGACTCTG
ATCAACGTCA GTGCACCATC ACCGGTCACC GACTTCAGTG CAACCCCGAG CACCGGCGCT
GCACCTCTGA ACGTTCAGTT CACTGACCTG TCCGGAAACA ATCCATTTGC ATGGGCATGG
AACTTCGGCG ATGGATCTAT CTCCGGAGCA CAGAACCCAA GCCACACCTA CACAACCGCA
GGGAACTACA CCGTTACCCT GACAACTCAG AACAGTGTCG GAACCAGCAC CAAGTCCAAG
GTGGTCTCGG TCATCTCACT GAGCAAGCCG GTCAGCAACT TCACGTTCGC TCCGGCAGCC
GGACAGGCGC CCCTGACCGT GCAGTTCGCC GACACCTCGT CGAACTCTCC ATCCTCGTGG
AGCTGGACCT TCACTGATGA CTTCTCGACC AGCAATGTCC AGAACCCATC ACACACCTTT
GCCACTGCAG GCACCTACGG CGTTCTTCTG ACCGCCTCGA ATGCAGCTGG AGCTGGGGAC
ATGAAACTGC AGACGATCAC CGTCTCCGCA GCACCAGTCA TCACTCCAGT CGCGGACTTC
ACCGCAACCC CGACAACCGG CGTTGCACCA CTCTCTGTCC AGTTCGCTGA CAAGTCGACC
AATGCAGATG TATGGGTCTG GACCTTCGGC GATGGGGCTA CATCAACCCT GCAGAATCCA
CCAGCGCATA CCTACACAAC AGCAGGCACC TACACGGTAC AGCTGCAGGC AGTCAACTCC
ACCTCAAGCA GATCCAACAC TGCATCGAAG ACGATAACCG TCACCGCTGC ACCGCAGACT
CTCCAGGCAG CCTTCAATGT TAACGCACAG ACTGTCCAGC TCGGAACTGC AGTCACCGGC
ACCGATGCAT CCACCGGGTA CCCGGCCGCA TGGTCATGGG ACTTTGGTGA CGGATTCACC
GCATCGAGCC AGAACATCAA CCACATCTAC AGTGCTGTTG GCACCTACAC CCTGAGTCTG
ACCGTCACGA ACGGAACCCA GACCAGCACT GCCAGCAAGA CGATCAACGT CTCCGCTGCA
CCAACGACCA CTGTTACAAC AACGGCAACC CAGGGTCAGC CCTACAACGG GCCACACAAC
GTACCTGGCA CTGTCCAGGC CGAGGACTAT GACCTCGGTG GACAGAACGT CGCCTACTAT
GACACCACCT CCGGCAACGC AGGCGGGGCA TACCGCACTG ACGATGTTGA CATCGAAGCA
GGCGCAAGCG GCTACGCTGT TGCCTACGTC ATCGGCGGCG AATACCTCAC CTACTCAGTC
GAAGCAGCAG CAGACGGCGA CTACCCAGTT ACCCTCAGAG CAGCCAACCC AGACGGAACC
ACAAAGACGG TGACTGTCTC AGCAGGTAGC TCTTCGACCC CTGTCAGTGT TGCATCCACC
GGCTCGTTCG ACACCTACAA CTCCTTCACC TCTGCAGGTA CACTTCACCT CGAACAGGGT
AGGAATGTTG TCAAGGTTGC CTTCAGTGCC TCAAGGATGA ACCTTGACTA CATCACGATC
GGGTCTGGTG TAACGCCAAC CACGACCGTG ACCACACAGC CAACCACAAC CGTAACCACA
CAGCCAACCA CTGGGGCGGC TAGCTTCACC GTTAGCCCAA CCTCCGGAAA ACACTCACTC
TCCGTTGCAC TCACAGACAC CACCACTGGC GGCAACCCCG TCTCCTGGAA GTGGAACTGT
GGGAACGGCC AGACCTTCTC AGGCCAGAAC ATCGGCCTGA ACAGAATCTG GTACAACAAC
GCAGGGACGT ACACCATCAC CCTGACGGTG ACTGATGCGA ACGGTTCAAC AAGGACCGCA
ACGCACACTG TCACAGTCTC GTGA
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| Protein sequence | MRLPKSNPSG RLFLVSLMVI MACLLIPGAF AASATADHTN DKGYGGIGPI VNFTVDHSSI
TAGDSVKFTD TSYDNITSQA WDFGDGSISL DANPTHTYTA AGTYVVALNV QNATGYASNT
SGMTVNGYTL PSITVASVQD VAPQFNIGLN GNTYGVFGAT GSASTFSNAT VNVGDALTFT
DASTGVPTTW SWNFGDASDL ITTQNATHTF TQAGTYVVYL TAGNVNGQKT SNSLTIVVNG
GIAPVSAFTA SNNGVENSSV AGTPDYANAA YLNGTAPMTV SFTDKSTKVP SSWSWTKNGT
VFSTEQNPSL TLNQGQYQII LNATNAQGSN LSSIWINVAG PSTPIAHFVA TPSTGTAPLS
VQFNDTSDGG LAAPTSWLWN FGDGTQGSTV QNATHTFTAA GTYTVTLQTR NGAGVSTPFT
GTITVNSPTT PSANFKINGS TADNYAQNPV TILVGQPVYF NDTSSGSPSS YNWIFSDGQP
VPTQANVSRS FSVPGTFWVY HTVTNAAGSD SKLNLFTVTV APVTAAPVAS FTKNATDGEA
PLTVLFTNTS TGAPTTFQWL INGVQQGTDA NLTYTFATPG TYSVVLIASN AGGSSAAAAQ
TVTVSGVSGI PNANFTFTSP SFAAPSQVQF TYAGGNATQF LWTFDDGTTS TEMNPVHTYQ
NAGTYSVRLT TTNAKGTNYK INDVTITPLG NPVASFNANT TAVTKASAAS AQVSGQSPFT
VVFNDTSSER PTAWYWNLGD GTTSTSQNIT HTYTTPGKYA VYLVVANSLG ASDYVYAPTL
INVSAPSPVT DFSATPSTGA APLNVQFTDL SGNNPFAWAW NFGDGSISGA QNPSHTYTTA
GNYTVTLTTQ NSVGTSTKSK VVSVISLSKP VSNFTFAPAA GQAPLTVQFA DTSSNSPSSW
SWTFTDDFST SNVQNPSHTF ATAGTYGVLL TASNAAGAGD MKLQTITVSA APVITPVADF
TATPTTGVAP LSVQFADKST NADVWVWTFG DGATSTLQNP PAHTYTTAGT YTVQLQAVNS
TSSRSNTASK TITVTAAPQT LQAAFNVNAQ TVQLGTAVTG TDASTGYPAA WSWDFGDGFT
ASSQNINHIY SAVGTYTLSL TVTNGTQTST ASKTINVSAA PTTTVTTTAT QGQPYNGPHN
VPGTVQAEDY DLGGQNVAYY DTTSGNAGGA YRTDDVDIEA GASGYAVAYV IGGEYLTYSV
EAAADGDYPV TLRAANPDGT TKTVTVSAGS SSTPVSVAST GSFDTYNSFT SAGTLHLEQG
RNVVKVAFSA SRMNLDYITI GSGVTPTTTV TTQPTTTVTT QPTTGAASFT VSPTSGKHSL
SVALTDTTTG GNPVSWKWNC GNGQTFSGQN IGLNRIWYNN AGTYTITLTV TDANGSTRTA
THTVTVS
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