Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2660 |
Symbol | |
ID | 7272482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2787108 |
End bp | 2788316 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643571251 |
Product | phosphoesterase RecJ domain protein |
Protein accession | YP_002467647 |
Protein GI | 219853215 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000971768 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.887166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTGG GGGAGAGGGC AGCGCTGATC GCCGATCATC TGCGGAAACA GGAGTATGTC GAGGTGTACG GGCACCATGA TGCGGATGGG ATAGCCGCAG CGGCGATCCT CTGCCATGGG CTCTACCGGC TCGGCATCGG GTTCCGGCTC AGGATAGCTG GCAGCCTCCC TGCACTCGCT GAGGATCCGG AGCAGCCGGT CATCCTCTGT GATATGGGAT CCGGCAGCGC AGGCCTCCCC GACCAGACGA TCGTGATCGA CCATCACACA CCCGGGTTCC CGGGGGCCTA TCACCTGAAC CCGAACCTCT TCGGGCTCGA TGGTGAGCAG GTCCTCCCGG CGTCAGGGTG TGCGTATCTG GTCGCCTCCG CCCTCGGGGA CAACCGCGAC CTGGCGGGAC TTGCACTGCT CGGGATGATC GGTGATCATC AGCAGATGGA AGGACCGAAC CGGGATATCT TCAATGAAGG GGTTGGCAAC AGCGTGGTCT CGCCGGAGCG TGGCCTCCTC CTCCCGGGTC GGACCCGGGA AGAGCAGTTG CTACTGGCCA CCTCGCCGTA CCTGGCCGGG ATCAGCGGCG ATGAGGAGAC GGTCAAACAG ATCATCGCAG ATGAGGGAGA GCAGGGGTCA GAGGAACCCC TCCTCTCGGC GATCGTCTTT GCGGCTGCAG AACAGGCATC TCCCGCAGCC CTTGATCGGG TCTATGGGGA TCAGTATGGT CTCCAGCGGG AGGTGATCGA GGACGGTCAC ACCCTGGCGG CTGTGATCGA CGGGTGCGGC AAGGCCGGGA TGGGGGGGCT CGCAGCCTCC CTCTGCCTCA GGTCCGCCGT TTCGATCGCC GAGGCATGGG CTGTCACTGC CCGCTTCCGA CAACAGGTGA TCGCAGCGAT CAACGGACGC GAACAGATCG GCGACTGGGC CGGCTGTTAT ATGGTGCCTG ATTCGGCGCT CGTCGGAGAT GTGGCCGACG CCCTCCAGTG TGATCTGCCC TCAGGTGACC TGGTCGTCGT CGTGGCAGCA GAAGGGCCTA CCAGTCGTCT GTCAGTCAGA ACACCACAGA CGAGGGAGAT AGACCTCGGC CGGCTGCTCG CTGACCTTGC CCTCGATTAT GGGGGCACGG GCGGCGGTCA CCGCCACCGC GGGGGTGCGA CCATCAGGTC TGCAGCTGTT CCCGGCTTTC TCGAACAGTT GACGGAGGCC CTGGTATGA
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Protein sequence | MSLGERAALI ADHLRKQEYV EVYGHHDADG IAAAAILCHG LYRLGIGFRL RIAGSLPALA EDPEQPVILC DMGSGSAGLP DQTIVIDHHT PGFPGAYHLN PNLFGLDGEQ VLPASGCAYL VASALGDNRD LAGLALLGMI GDHQQMEGPN RDIFNEGVGN SVVSPERGLL LPGRTREEQL LLATSPYLAG ISGDEETVKQ IIADEGEQGS EEPLLSAIVF AAAEQASPAA LDRVYGDQYG LQREVIEDGH TLAAVIDGCG KAGMGGLAAS LCLRSAVSIA EAWAVTARFR QQVIAAINGR EQIGDWAGCY MVPDSALVGD VADALQCDLP SGDLVVVVAA EGPTSRLSVR TPQTREIDLG RLLADLALDY GGTGGGHRHR GGATIRSAAV PGFLEQLTEA LV
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