Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2631 |
Symbol | |
ID | 7270111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2757076 |
End bp | 2758107 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643571226 |
Product | SMP-30/Gluconolaconase/LRE domain protein |
Protein accession | YP_002467622 |
Protein GI | 219853190 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.118189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000564983 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTATTCCA CACAATGGGG TAGCATCGGT TGGGGCTATG GGCAGTTCGG GGATCCATGT GGTGTCGCTG TGGACAGCGC TGGAAACGTC TATGTGGTCG ACACAGGGAC CAACCGGGTC CAGAAGTTCA CGTCGACCGG GACGTTCATC ACACAATGGG GGAGTGCTGG TACTAGAAAC AGACAATTTT TCGGGATAGG AGGTATCGCG GTCGACAGCG CCGGAAATGT CTACGTAACC GATGAGCATA ACTCCCGGGT CCAGAAGTTC GATTCGACCG GTATTTTTAT CACGAAATGG GGGAGTTATG GTCCAGGAGA CGGGCAGTTC AAATCCCCCG AAGGGATCGC GGTCGACAAC GCCGGAAATG TCTACGTCGT CGACACAGTG AACAACCAGA TCCAGAAGTT CACGTCAGAC GGTACTTTCA TCACCAAGTG GGGGACGCGG GCCTCCGGGA TCGCGGTCGA CTCCGACGGC AACGTCTACG TCACTGACGC AACTTCCAAC CAGGTCCAGA AGTTCACCTC GGACGGCACC CACCTCCTGA ACTGGGGAAC TTCCGGCTCC GAAAACGGGC AGTTCAGCTC CCCTGAAGGG ATCGCAGTCG ACAACGCCGG CAATGTCTAC GTCAATGACG TCGGGAACCA ACGGGTCCAG AAGTTCACGC CGGACAGCAC CTTTGTCACG AGCTGGGAGA CGGGAGCCTC CGGGATCACG GTCGACTCTG ACAGTTATGT CTACGTCGTC GACAGGGGTA ATTGCCGGAT CCAGAAGTTC GTTCCCGCTG GTTCGACACC GACCATCTCC CAAAAAAAAG AAGTCCCGGG CGGTGACGAC ACCCCGAATT CGACCAGCAA CAGCACGTGC GATGACGTGA ACGGCGACGG TGTTCTCGAT TTCAACGACG TGGTCCTCTT CTTCAACCAG ATGGACTGGA TCGCAGAGAA CGAACCGGTC AGTGCATTCG ACTTCAACAA GAACAACCAG ATCGATTTCA ATGATGTGGT CGTCCTCTTC AACACACTGT AG
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Protein sequence | MYSTQWGSIG WGYGQFGDPC GVAVDSAGNV YVVDTGTNRV QKFTSTGTFI TQWGSAGTRN RQFFGIGGIA VDSAGNVYVT DEHNSRVQKF DSTGIFITKW GSYGPGDGQF KSPEGIAVDN AGNVYVVDTV NNQIQKFTSD GTFITKWGTR ASGIAVDSDG NVYVTDATSN QVQKFTSDGT HLLNWGTSGS ENGQFSSPEG IAVDNAGNVY VNDVGNQRVQ KFTPDSTFVT SWETGASGIT VDSDSYVYVV DRGNCRIQKF VPAGSTPTIS QKKEVPGGDD TPNSTSNSTC DDVNGDGVLD FNDVVLFFNQ MDWIAENEPV SAFDFNKNNQ IDFNDVVVLF NTL
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