| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2630 |
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| Symbol | |
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| ID | 7270110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2753909 |
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| End bp | 2756701 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643571225 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_002467621 |
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| Protein GI | 219853189 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.668358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0001414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGGTCGG CATTTTTTTT ATTCCTATTC TGTGTCGTGC TGCTCCTCTG TAGCATCGTC
CAGGTCGTCT CTGCCGAAGG GGGATATACC TACACCGCTC AATGGGGAAA TGGAGGTCTG
GGATACGGGC GGTTCTCCGA TCCGGAGGGT GTCGCCGTGG ATGGCACCGG AGCCGTATTC
GTCGCCGACC GGTTGAGCAA CCGGATCCTG AAATTCACGT CGACCGGCGA ATTCATCACG
CAATGGGGGA GTGAAGGTTC CGGAAACGGG CAGTTCGAGA ATCCCGGTGG CATCGCCGTG
GACAGCGCCG GCAATATCTA CGTAACCGAC ACCTGGAACC ACCGGGTCCA GAAGTTCACA
TCGACCGGCG AATTCATCAC GAAATGGGGC GGTGAAGGCT CCGGCGACGG ACAGTTCAGC
TATCCCTATG GTATCGCCGC GGACCGTGCC GGCAATGTCT ACGTCACTGA TACGTGGAAC
CATCGGATCC AGAAGTTCGA TGCGACCGGC GCATTCATCA CGAAATGGGG CAGTGACGGT
TCCGGAGACG GGCTGTTCGA GAATCCCGGT GGTATCGCTG TGGACAGTGC GGGCGACGTC
TACGTAACCG ATTCGTGGAA TCCCCGGGTT CAGAAGTTCA ACTCGACCGG GACATTCATC
ACGAGATGGG GCAGCGAAGG TTCCGGAGAC GGGCAGTTCG GCACATCATA TGGTATCGCC
GTGGACAGCG CCGGAAATGT CTACGTCGTC GATATAGGAA CCCACCGAGT CCAGGAGTTC
ACGTCGACCG GCGAATTCAT CACGAAATGG GGCGGTTATG GCTCGGGAGA CGGGCAGCTC
AGTTATCCGC GTGGAATCGC TCTGGACAGT GCCGGTAACG TCTACGTCGT CGACACCGGG
AACAACCGGG TCCAGAAGTT CACATCGACC GGCACATTCA TCACGAAATG GGGCGGAGAA
GGTTCAGGAG CCGGGGAGCT CAACCATCCC CATGGTGTTG CACTTGACGA CGCCGGAAAT
GTCTATATCA TCGACACCTG GAACAACCGG GTCCAGATAT TCACTTCGAC CGGCGAATTC
ATCGCGAAAT GGGGCAGCAA AGGCTCGGAA GATGGACAGT TCATCTATCC GTACAGTATC
GCCGTGGACA GTGCCGGCAA CGTCTACGTC GTCGACACCG GGAACAACCG GGTCCAGAAG
TTCACATCGA CCGGCACATT CATCACACAA TGGGGCGGTG AAGGTTTCGG AGACGGGCAG
TTCAACTTTC CTGGCGGCAT CACCGCGGAT AGCGCTGGCA ACGTCTACGT CGTCGACACG
GAGAACGACC GGGTCCAGAA GTTCACATCG ACCGGCGAAT TCATCACGAA ATGGGGCGGT
GATGGTTCGG GAGTCGGGGA GTTCAACTAC CCCTATGGTA TCGCCGTGGA CCGTGCCGGC
AACGTCTACG TCGTCGACAC CGGGAATAAC CGAGTCCAGA TATTCACTTC GACCGGCACA
TTCATCGCAC AATGGGGCGG TTCGGGTTCC AGAGACGGGC AGTTCAACTA TCCGGGCGGT
ATCGCCGTCG ACAGCGCCGG CAACGTCTAT GTTGTCGATG AATCGAACAA CCGGTTCCAG
AAGTTCACAT CGACCGGCGA ATTCATCACA AAGTGGGGGA GTGAAGGTTT GGGAGACGGG
GAGTTCACCT ATCCCCGTGA TGTTGCAGTG GACAGCGGCG GCAATGTCTA TATCGTCGAC
GAATCGAACT CGCGGATCCA GAAGTTCTCC TGGGTCGCTC AGATTATGCC GCTCATTCCC
AGTTTCACGG CGGTTCCAAC TGCAGGATCT GCACCGTTGA CGGTACAGTT TATCGACACC
ACAACCGGGG GGGCGACAGC CTGGTACTGG GACTATGGGG ACGGGACGAC CAGCACGGAC
GGAACGGTTC AGAACCCATG TCATCAGTAC AGTGCTCCTG GCACCTACTC GGTCATACTG
ACCGCCGACA GGACGACATC GGGGAGCAGA TCGATAACAA AGAAGGGGTA TATAACGGTC
ACGGTCCCGC CGCTCGTTCC CAATTTCACG GCGGTTCCGA CTGCAGGATC TGCACCGTTG
ACGGTACAGT TTATCGACAC GACGACCGGG AGTCCAGTTC ACTGGTACTG GGACTATGGG
GACGGGACGA CCAGCACGGA CGGAACGGTT CAGAATCCAC GCCATCAGTA CAGTGCTCCT
GGCACCTACT CGGTGACGCT GACCGCCGAC AGGGTGCCGA CAGGGAATAG ATCGATAACA
AAGAAGGAGT ATATTACCGT CTCGGTACCA CCGCTCGTTC CCAATTTCAC GGCGACGCCG
ACCTCGGGGT CTGCACCGTT GACGGTACAG TTCAACGATA CAACGACCGG GGGTGCGATT
CACTGGTTCT GGGACTTCGG GGACGGGACG ACCAGCACGG ACATAACGGT TCGGAATCCT
AGCCACCTGT ACAGTGCTCC CGGCACCTAC TCGGTCACGC TCTACGTCTT CAATGATACC
GCCGGGTCAC AACGGATCAT AAGGACCGGG TACCTCACGG TGACCAGCCC GATGAAACAG
GTTCCGGGAG GATCCGCTAT GCCGCACGAC CTCAACAATG ACGGGCTCTA TGAGGATGTG
AACGGCGACG GGGCCGTTGA CTTCAGCGAT GTGGTCCTCT TCTTCAACCA GATGGACTGG
ATCGCAGAGA ATGAACCGGT CAGTGCATTC GACTTCAACA GGAACGGGAC GATCGATTTC
AATGATGTCG TCATGCTGTT CAACACACTG TAG
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| Protein sequence | MRSAFFLFLF CVVLLLCSIV QVVSAEGGYT YTAQWGNGGL GYGRFSDPEG VAVDGTGAVF
VADRLSNRIL KFTSTGEFIT QWGSEGSGNG QFENPGGIAV DSAGNIYVTD TWNHRVQKFT
STGEFITKWG GEGSGDGQFS YPYGIAADRA GNVYVTDTWN HRIQKFDATG AFITKWGSDG
SGDGLFENPG GIAVDSAGDV YVTDSWNPRV QKFNSTGTFI TRWGSEGSGD GQFGTSYGIA
VDSAGNVYVV DIGTHRVQEF TSTGEFITKW GGYGSGDGQL SYPRGIALDS AGNVYVVDTG
NNRVQKFTST GTFITKWGGE GSGAGELNHP HGVALDDAGN VYIIDTWNNR VQIFTSTGEF
IAKWGSKGSE DGQFIYPYSI AVDSAGNVYV VDTGNNRVQK FTSTGTFITQ WGGEGFGDGQ
FNFPGGITAD SAGNVYVVDT ENDRVQKFTS TGEFITKWGG DGSGVGEFNY PYGIAVDRAG
NVYVVDTGNN RVQIFTSTGT FIAQWGGSGS RDGQFNYPGG IAVDSAGNVY VVDESNNRFQ
KFTSTGEFIT KWGSEGLGDG EFTYPRDVAV DSGGNVYIVD ESNSRIQKFS WVAQIMPLIP
SFTAVPTAGS APLTVQFIDT TTGGATAWYW DYGDGTTSTD GTVQNPCHQY SAPGTYSVIL
TADRTTSGSR SITKKGYITV TVPPLVPNFT AVPTAGSAPL TVQFIDTTTG SPVHWYWDYG
DGTTSTDGTV QNPRHQYSAP GTYSVTLTAD RVPTGNRSIT KKEYITVSVP PLVPNFTATP
TSGSAPLTVQ FNDTTTGGAI HWFWDFGDGT TSTDITVRNP SHLYSAPGTY SVTLYVFNDT
AGSQRIIRTG YLTVTSPMKQ VPGGSAMPHD LNNDGLYEDV NGDGAVDFSD VVLFFNQMDW
IAENEPVSAF DFNRNGTIDF NDVVMLFNTL
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