Gene Mpal_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2616 
Symbol 
ID7271885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2739591 
End bp2740253 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content64% 
IMG OID643571212 
Productprotein of unknown function DUF159 
Protein accessionYP_002467608 
Protein GI219853176 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.163016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGCC GGAACTCTCT CGTATGGACG GACGACCGCA GCAACCGGTT CAGAGTCCCC 
CTGACGAACC GGGGCGGCCG GTCCCGTTTC AATGTCGCAC CGTCCCAGAC GATGCCGGTG
ATCGTGAATG ACGGTCAGGT GTTGATGGTC ATGATGGCGT GGGGGCTTCT CCCGCACTGG
GCGAACAGCC TGCAGGGATC GAATTGTCCC ATCAACGCCC GGGCGGAGAC GCTGGCCGAG
AAGCCGCTCT TCCGCGGGCT GCTGAAGCAG CACCGGTGCC TGATCCCGGC GAGCGGGTTT
TACGAGTGGA AGTGGGCCGG CTCTCGCAAG CAACCCTACT ACTTCCGCCT GAACGAGTCG
CCCCTCTTCG CCTTCACCGG CCTCTACGAC GTCTGGCACG GGGCCGATGG GAATGCTTAC
CCGACCTACA CGATCATCAC GACGGAAGCC AACGAACTCG TCAACCCGAT CCACAACCGC
ATGCCGGTGA TCCTCAGGCC TGAGGACGAG GGACGCTGGC TGACCTCCAC GCCGCCAGCA
CCGGACGAGA TGACAGCGAT CCTCGGGGCG TATCCCTCTG AAGCGATGGA GGCCGGCCCG
GTCTCGCCCC GCGTGAACAA CCCAACCGAG GACGACGAGG TGCTGATCGC CCGGGTCTTA
TGA
 
Protein sequence
MCGRNSLVWT DDRSNRFRVP LTNRGGRSRF NVAPSQTMPV IVNDGQVLMV MMAWGLLPHW 
ANSLQGSNCP INARAETLAE KPLFRGLLKQ HRCLIPASGF YEWKWAGSRK QPYYFRLNES
PLFAFTGLYD VWHGADGNAY PTYTIITTEA NELVNPIHNR MPVILRPEDE GRWLTSTPPA
PDEMTAILGA YPSEAMEAGP VSPRVNNPTE DDEVLIARVL