Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2616 |
Symbol | |
ID | 7271885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2739591 |
End bp | 2740253 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643571212 |
Product | protein of unknown function DUF159 |
Protein accession | YP_002467608 |
Protein GI | 219853176 |
COG category | [S] Function unknown |
COG ID | [COG2135] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.163016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGTGGCC GGAACTCTCT CGTATGGACG GACGACCGCA GCAACCGGTT CAGAGTCCCC CTGACGAACC GGGGCGGCCG GTCCCGTTTC AATGTCGCAC CGTCCCAGAC GATGCCGGTG ATCGTGAATG ACGGTCAGGT GTTGATGGTC ATGATGGCGT GGGGGCTTCT CCCGCACTGG GCGAACAGCC TGCAGGGATC GAATTGTCCC ATCAACGCCC GGGCGGAGAC GCTGGCCGAG AAGCCGCTCT TCCGCGGGCT GCTGAAGCAG CACCGGTGCC TGATCCCGGC GAGCGGGTTT TACGAGTGGA AGTGGGCCGG CTCTCGCAAG CAACCCTACT ACTTCCGCCT GAACGAGTCG CCCCTCTTCG CCTTCACCGG CCTCTACGAC GTCTGGCACG GGGCCGATGG GAATGCTTAC CCGACCTACA CGATCATCAC GACGGAAGCC AACGAACTCG TCAACCCGAT CCACAACCGC ATGCCGGTGA TCCTCAGGCC TGAGGACGAG GGACGCTGGC TGACCTCCAC GCCGCCAGCA CCGGACGAGA TGACAGCGAT CCTCGGGGCG TATCCCTCTG AAGCGATGGA GGCCGGCCCG GTCTCGCCCC GCGTGAACAA CCCAACCGAG GACGACGAGG TGCTGATCGC CCGGGTCTTA TGA
|
Protein sequence | MCGRNSLVWT DDRSNRFRVP LTNRGGRSRF NVAPSQTMPV IVNDGQVLMV MMAWGLLPHW ANSLQGSNCP INARAETLAE KPLFRGLLKQ HRCLIPASGF YEWKWAGSRK QPYYFRLNES PLFAFTGLYD VWHGADGNAY PTYTIITTEA NELVNPIHNR MPVILRPEDE GRWLTSTPPA PDEMTAILGA YPSEAMEAGP VSPRVNNPTE DDEVLIARVL
|
| |