Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2615 |
Symbol | |
ID | 7271884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2738052 |
End bp | 2739296 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643571211 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002467607 |
Protein GI | 219853175 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.543529 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTATCA CACCCTTTAA ACCCACGAAA TTTCAACCAA CGAGATGGAC ATTACTTTTT CTCCTGCTCT CGGCCATGAT GATCCTCATG GGAGGAGCAG CTATCGCGCC GGCTCTGCCA TTGATCAGCG CAGCATTTCC CGATACACCA GACTCCCTCA TCTCCTTAAT TGTTACACTC CCTTCGCTCG CAATTGCCAT CTCCGGCATC TTCATCGGTG CTCTTTCGGA TAAGATCGGC AAAATGAAGA TCCTTGTTGC CTCTGTTGCT ATCTTCACCA TCGCAGGATG TTCCGGATAT TTTCTCACCT CGATACATGC ACTATTACTC AGTAGAATCA TCCTTGGAAT CGGGATTGCC GGTATCACCT GCACGACATC CTCTCTGATC CCCTGTTATT ACGAGGGACC TACCCGTGCC AAAGTTCTCG GTTATCAGGC GGCTGCTATG GGGTTCGGGG TATTAATTCT TGAAATGAGT GGGGGACTTC TCGCCGGGAT CTCCTGGCAT GCAGCGTTCC TGATCTACCT GATCGGTGTT GTCATTCTCG CAGGTGTACT TCTCTCGATG AAAGAGCCCG TTCTTCCGAA GATTGAAAAG AATACGGTAG AAGCCAATGA GGAGTTCCCT CTCTCCCTCC TCCTCTTAAC CTACATAACC CTGTTTATGG GAAGCATGCT CTTCTACCTC ATGCCTACGA AGTTCCCCTA CTTTATTGCA AATCTTGATG CAGCACGGAT CTTGGGCGAA AACACCGCAC TTATCAGCGG TCTATTCCTT GGTATCATGG GTTGTGCCGC ATCAATCATA GGTATCTTTT ACGGGAGACT TGTCTGGAGA TTCAACCAAT ACACGATCCT CGCCATCATA TTCATCTGCT TTGGTATCGG GTACTGCAGT CTCGGGTTAG CCACGTCGCT TCCCGTTGTT GCTTTTTCAG TGATCTGTAT CGGTCTGGGT AACGGTATTC TGATGCCGAC GATCTTAACT TGGATCGCTA CGATCACGCC AAAACAGTTC CTCGGCAGGG CAAGTGGCGG ATTTTCGGTG GCCCTGAACA TCGGCCAGTT CGCTTCCAGT CTTGTTGTCG TGCCGGTCAT TGCCATTGCT GCGACAACCA GTACGATGTT CCTTGCATTC GGATCTCTGG CGTTTGTGAT CGCCCTGCCA TATCTTCTCG CGATGATGAA AGAACGGCAT ACCCTACCAC AGGGAGTAGT CCGAAAAATG GAATCTGATC TATAA
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Protein sequence | MVITPFKPTK FQPTRWTLLF LLLSAMMILM GGAAIAPALP LISAAFPDTP DSLISLIVTL PSLAIAISGI FIGALSDKIG KMKILVASVA IFTIAGCSGY FLTSIHALLL SRIILGIGIA GITCTTSSLI PCYYEGPTRA KVLGYQAAAM GFGVLILEMS GGLLAGISWH AAFLIYLIGV VILAGVLLSM KEPVLPKIEK NTVEANEEFP LSLLLLTYIT LFMGSMLFYL MPTKFPYFIA NLDAARILGE NTALISGLFL GIMGCAASII GIFYGRLVWR FNQYTILAII FICFGIGYCS LGLATSLPVV AFSVICIGLG NGILMPTILT WIATITPKQF LGRASGGFSV ALNIGQFASS LVVVPVIAIA ATTSTMFLAF GSLAFVIALP YLLAMMKERH TLPQGVVRKM ESDL
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