| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2606 |
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| Symbol | |
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| ID | 7271874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2729608 |
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| End bp | 2730879 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643571202 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_002467599 |
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| Protein GI | 219853167 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.749464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCAGA CACTCCAGCA GCACGGGCCG GTGGACCTGG CCTTCACCGC TCCGCCCTCC
AAGTCCTTCA CCCACCGGGC TCTGATCATC GCAGCCCTGG CTGACGGGGA GTCACTGATC
CGCGGCCCCC TGATCGCGGA GGACACCCTG TTGACAGTCC GGGCACTCCA GGCACTCGGT
GCCGATATCA CCGACACACC GGAAGGCTAC CGGGTGCAGG GGACCGACGG CCGGCCCGAC
TGCGCAGAGG GGACCGTCCT GGACCTAAAG AACTCGGGGA CGAGCCTCCG GCTGCTCAGT
TCGATCGCCC TCCTCTGCTC CAGCACCGCC GGGGTCACGC TGACCGGCTC CCCCCGGATG
CAGCAGCGGC CGATCGGAGA ACTCGGCGAC GCGATCCGAA CCCTCGGCGG CTCGGTCCGA
TACCTGGCCG CAGACGGTTA CCCGCCCTGT GTCGTGCAGG GGCCGCTCGT CGGCGGCGAA
GCGACCCTCG ACGGCTCGGT CAGCAGCCAG TTCATCTCGT CGCTGCTGCT GGCTGCCCCA
TATGCTGTCC GTCCGGTGGA CCTGAAGGTC GCCCGGCAGC CGGTCTCCCG ATCGTACCTG
GAGATCACCG GTGCGGTGAT GGCCGCGTTC GGGGTTCCGG TCAGGCGGGT GGGGTACACC
CACTTTACCG TCCAGCCGGC CCGGTACCGC GGACGGGAGT ACACGGTGGA GGGAGACTAC
TCGTCCGCCT CGTACTTCTT CGCCCTGGCC GCCACCCTCG GCGGGAAGGT GACGGTCAGA
AATCTGAATC ATGACTCGGT GCAGGGCGAC CGGCTCTTCG TTGCAGCGCT CAAAGCGATG
GGCTGCCGGG TCACCAGGGA GACCGACGGC GTCACCATCG AGCGGACCAA AAACCTCCAC
GGGATCTCCA TCGATATGAC CACAGCCCCT GACACGGTCC AGACCCTCGC GGTGGTGGCC
GCCCTGGCCG ACTCGCCGAC AACCATCACC GGGGTCGGCC ATCTCCAGTA CAAGGAGAGC
GACCGGGTGG CCGTGACCGC TGGGACCCTC AGAGCCCTCG GCTGCACCGT CGACATCAGC
GCCGACGCGA TCACCATTCA TCCCGGACCC CTTCATGGCG GGGTGATCGA CCCGCACGAC
GACCACCGGA CAGCGATGGC CTTCGCCGTC CTCGGGCTGG CCGTTGGTGA TGTCACGATC
GAAGACCCCG CCTGTGTCGG CAAGTCGTTC CCGAAATTCT GGAACGCACT CGCCGCAGGA
GGATTATTAT GA
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| Protein sequence | MDQTLQQHGP VDLAFTAPPS KSFTHRALII AALADGESLI RGPLIAEDTL LTVRALQALG
ADITDTPEGY RVQGTDGRPD CAEGTVLDLK NSGTSLRLLS SIALLCSSTA GVTLTGSPRM
QQRPIGELGD AIRTLGGSVR YLAADGYPPC VVQGPLVGGE ATLDGSVSSQ FISSLLLAAP
YAVRPVDLKV ARQPVSRSYL EITGAVMAAF GVPVRRVGYT HFTVQPARYR GREYTVEGDY
SSASYFFALA ATLGGKVTVR NLNHDSVQGD RLFVAALKAM GCRVTRETDG VTIERTKNLH
GISIDMTTAP DTVQTLAVVA ALADSPTTIT GVGHLQYKES DRVAVTAGTL RALGCTVDIS
ADAITIHPGP LHGGVIDPHD DHRTAMAFAV LGLAVGDVTI EDPACVGKSF PKFWNALAAG
GLL
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