Gene Mpal_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2600 
Symbol 
ID7270730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2724749 
End bp2725054 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content60% 
IMG OID643571196 
Productlarge-conductance mechanosensitive channel-like protein 
Protein accessionYP_002467593 
Protein GI219853161 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTTG CAGAAGAGTT TGTCGCGTTC TTGAAGCAGT ACCAGGTGAT CGGACTGGCC 
GTCGCGTTCA TCATGGGGGT GACGGCGACC AAGGTGGTGA CCGCCGCGGT CAACGATCTG
ATCATGCCGA TCATCGCGGC CCTCCTCCCG GACGGGGACT GGAAGACGGC CGTCCTCCAA
CTGGGGCCGG TGAAGTTCCT GGTTGGGGAC TTCGCTGGGG TGCTGCTCGA GTTCGTCATC
ATCGCGCTGG TGATCTTCAT GATCGTAAAG TACCTGATGA AGGAGGACGC GACCGAGAAG
CGCTGA
 
Protein sequence
MSLAEEFVAF LKQYQVIGLA VAFIMGVTAT KVVTAAVNDL IMPIIAALLP DGDWKTAVLQ 
LGPVKFLVGD FAGVLLEFVI IALVIFMIVK YLMKEDATEK R