| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2599 |
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| Symbol | |
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| ID | 7270729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2722624 |
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| End bp | 2724645 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643571195 |
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| Product | PAS fold-4 domain protein |
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| Protein accession | YP_002467592 |
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| Protein GI | 219853160 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.96772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTTA AAACATCCCT CTCCAGCGGG ATCGATCCCG GCGCAGCCAT TCTGGCCGCA
CTCATCGTGA TCACCTGGCT GATCACGATC GCATCAATCT TCGGTGCCCT TCCTCCACTC
CACCCGTTCC TGCTCCTGCT GCCGGCGGTG CTGCTCGCCT ATCGGTACCA GAAGCGGGGA
GTAGCGGTGG CCGGGGGATT CGCCATCATC TACCTCCTCC TGCTCCTCCT CTCCGGTCCG
AACCTGCCGG CGATCCTCGG CGGCGGGGTC GCGGCCGTGA TGATCGTGGT AGCCGCAGCA
GCCGTTGCCT TCCCATCATA CGAAGCAGAG GCCTACGGCC TCTGGTACCG GGCGGTCTAC
CACCGTTCAG GCGAGGCGAT CCTCTTCTTC TACCCCGAGA CCGGGGCTCT CCATGATGCC
AACCTGGCGG CCGGAGCTCT GCTCGGCTAT CCCCTCGAAG ATCTGCTCCA GCGACCGTTC
ACGTCGTTCT GTGACGGAAA CCCGGACCTG ATCGCCAGGG TTCGGGACCT CCCGCAGAGG
AAACAGATCT ATGAGGAGGA AGACTGGTTT GCCGGTAAGG AAGGCCGACT GTACCTCCGG
TACTCCCTGG CCATGATCAC CGAAGGGCTG GCGATCTGCA GGCTCGCCGA CAGAACAACA
GAGCGGAATT TCCTCGACCG GCTGGTCAGA AAGGAGGAGG ACGAGCGCCA CCTGCTCGCG
GCCCTCCCGG CCACCGCCGG GATCCTCTTC GACGAGGACC TGCGGATCAC CGCGGCCGGT
GGAAAAGCGC TCACCGAACT AGTCGGGCCG GCAGACCTAG TCGGAAGGAC TCTCTGGGAA
GGGCTTCCCC ACACCCTCGC AGCCCCGTTT GAACCACCTT TCCGGGCGGC GCTGACCGGT
CGGGAGGCCG AGGCCGAGGT GACCGCCGGC GAAGCGATGT ACCTGGTCAG AGCCGCCCCG
GTGGTGAAGG AGGACTGGAC GATCAGTGGC GGGGTGGCCT CGATCACCGA GATCACGGGT
CTTCGGGAGG AGGGGAGAGC GCAGCAGAGC CTCTCTGCCG GAGACAACCT GTTCGCCTCA
CTGGTGCAGA GTGAGGGGAA GATCGACCGC GAACTCTGCA GCGAGACCCT CGCGGCGCTC
ATCGCCCGGA CAGGCTCGAC GATCGGATAC ATCGCATTCC CAGACCTGAC CGGCACCTGT
CTCTCGATAG CGGCTTGGTC CGAGGGGGTG ATGAAGGGGT GCGCCCTCCA TGACGCCGAG
TTCACTTGGA CAATAGCAGA CATGGGGCTC TGGGGAGTCC CGGCCCGGGA CAGGCTGCCG
GTGATCGTCA ACACCTACCA GGGGCAACTC CCCAAAGGAC ATCTCCCCCT GCAGCGCTAC
CTCGGAGTGC CGCTGGTCAG GGACGACCAG TTGATCGCCG TCGCCGGGGT CGCCAACAGC
CCGGTGCCGT ACACCGATGG GGACACCGAC GCGGCCAGGG AACTGCTGGC AGCGCTGGAC
CGGGTGCTCT CCATGCGGCG ACAGACCGAC GAACAGAGGA GGGAACTGAC ACACTTTCAG
TCGCTCTTCA CCCACGGACC GTTCCCGGCG GTGGTGCTGA ACCGGGAGAA CGAGATCCTG
GAGGCAAACC CGGCCTTCGT CACCCTCACC GGCAGAACTG GGGGTTCGGT CCTCGATCTC
CTGCAGCCGG AGGACCTGGG CAGGACCAGG ACCTTCCTTG CGAACGCCAG GATCGGCCAG
GGATCAGGAG AGGGAGGGAT CGAGTGCCGG CTGCTGATAC AGAACGGTCA TCACGATCTA
TACTGCCAGG CATCGGTCAC AGCCGAGCGG GACCTCCTAG TGGTGATGGT CGAGATCACT
GGCGAGAGAC AGGCTGCAGA GGCACGCCGG CAGATCGCCG CCGAACTGCA GCGCCTGACC
GGGAGAGAAT TGACCCCTGA CGAAGAGGAG GCCTGGGATG CGCTGACCGC CCTGACCAGG
TTCAATACCG TCCCTGACCT GTTGAAGCAG AGAGGATCCT GA
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| Protein sequence | MTFKTSLSSG IDPGAAILAA LIVITWLITI ASIFGALPPL HPFLLLLPAV LLAYRYQKRG
VAVAGGFAII YLLLLLLSGP NLPAILGGGV AAVMIVVAAA AVAFPSYEAE AYGLWYRAVY
HRSGEAILFF YPETGALHDA NLAAGALLGY PLEDLLQRPF TSFCDGNPDL IARVRDLPQR
KQIYEEEDWF AGKEGRLYLR YSLAMITEGL AICRLADRTT ERNFLDRLVR KEEDERHLLA
ALPATAGILF DEDLRITAAG GKALTELVGP ADLVGRTLWE GLPHTLAAPF EPPFRAALTG
REAEAEVTAG EAMYLVRAAP VVKEDWTISG GVASITEITG LREEGRAQQS LSAGDNLFAS
LVQSEGKIDR ELCSETLAAL IARTGSTIGY IAFPDLTGTC LSIAAWSEGV MKGCALHDAE
FTWTIADMGL WGVPARDRLP VIVNTYQGQL PKGHLPLQRY LGVPLVRDDQ LIAVAGVANS
PVPYTDGDTD AARELLAALD RVLSMRRQTD EQRRELTHFQ SLFTHGPFPA VVLNRENEIL
EANPAFVTLT GRTGGSVLDL LQPEDLGRTR TFLANARIGQ GSGEGGIECR LLIQNGHHDL
YCQASVTAER DLLVVMVEIT GERQAAEARR QIAAELQRLT GRELTPDEEE AWDALTALTR
FNTVPDLLKQ RGS
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