Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2563 |
Symbol | |
ID | 7270690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2694193 |
End bp | 2694762 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643571157 |
Product | putative cache sensor protein |
Protein accession | YP_002467556 |
Protein GI | 219853124 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4564] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.800793 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC AATCACTTTC GTTCCTCATT TTGCTCGTCA TCGGCGCATC CCTCCTCGTC GCCGGCTGCG TACAGAACCA GCCCGTTGTC AACACCACGA CACCGGCACC TACCAGCACC CTCCTGCAGC AGGCGAACGC CACCTCAAAT ACCTCGCTCG TCTCCTTCGT CGACAGCGCC GTTGCCTATG CTAAGACCAA CGGCAAAGAG AGAGCCCTTG CAGAATTTAA CAATCCGAAC GGCTCGTTTG TCAAAGGGGA ACTCTATATC TATGCCTATG ATTTCAATGG CACCACCATC GCCCATCCAT TCAACCCTGA GAAGATCGGC ATCAACCGTA TGAACGAGAC CGATGCACAG GGAGGGCTCT TCATCAAGAA CCTGACTGAT ATGGCCTTGA ATGGAACTGG TTTTGTCCAG TTTGCCTACA TCAACCCAGC ACATAACAAT TCGGTCGAAT CCAAACTGGG GTATGTGGAG AAGGTGGACG ATACCTGGTA CCTCGGCTCC GGAATCTATA ACGGGCCGGT AAACACGATC GCAAAGAAGA CTATGAAACA ACAGCAATAA
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Protein sequence | MKKQSLSFLI LLVIGASLLV AGCVQNQPVV NTTTPAPTST LLQQANATSN TSLVSFVDSA VAYAKTNGKE RALAEFNNPN GSFVKGELYI YAYDFNGTTI AHPFNPEKIG INRMNETDAQ GGLFIKNLTD MALNGTGFVQ FAYINPAHNN SVESKLGYVE KVDDTWYLGS GIYNGPVNTI AKKTMKQQQ
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