Gene Mpal_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2563 
Symbol 
ID7270690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2694193 
End bp2694762 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content51% 
IMG OID643571157 
Productputative cache sensor protein 
Protein accessionYP_002467556 
Protein GI219853124 
COG category[T] Signal transduction mechanisms 
COG ID[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.800793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC AATCACTTTC GTTCCTCATT TTGCTCGTCA TCGGCGCATC CCTCCTCGTC 
GCCGGCTGCG TACAGAACCA GCCCGTTGTC AACACCACGA CACCGGCACC TACCAGCACC
CTCCTGCAGC AGGCGAACGC CACCTCAAAT ACCTCGCTCG TCTCCTTCGT CGACAGCGCC
GTTGCCTATG CTAAGACCAA CGGCAAAGAG AGAGCCCTTG CAGAATTTAA CAATCCGAAC
GGCTCGTTTG TCAAAGGGGA ACTCTATATC TATGCCTATG ATTTCAATGG CACCACCATC
GCCCATCCAT TCAACCCTGA GAAGATCGGC ATCAACCGTA TGAACGAGAC CGATGCACAG
GGAGGGCTCT TCATCAAGAA CCTGACTGAT ATGGCCTTGA ATGGAACTGG TTTTGTCCAG
TTTGCCTACA TCAACCCAGC ACATAACAAT TCGGTCGAAT CCAAACTGGG GTATGTGGAG
AAGGTGGACG ATACCTGGTA CCTCGGCTCC GGAATCTATA ACGGGCCGGT AAACACGATC
GCAAAGAAGA CTATGAAACA ACAGCAATAA
 
Protein sequence
MKKQSLSFLI LLVIGASLLV AGCVQNQPVV NTTTPAPTST LLQQANATSN TSLVSFVDSA 
VAYAKTNGKE RALAEFNNPN GSFVKGELYI YAYDFNGTTI AHPFNPEKIG INRMNETDAQ
GGLFIKNLTD MALNGTGFVQ FAYINPAHNN SVESKLGYVE KVDDTWYLGS GIYNGPVNTI
AKKTMKQQQ