Gene Mpal_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2562 
Symbol 
ID7270689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2692989 
End bp2693975 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content59% 
IMG OID643571156 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_002467555 
Protein GI219853123 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.518295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTTG CATTGCATAT CCAGAACCTG ACCCGGCGTT TCAACGATCT GGTCGCCGTC 
GACAATATCT CCTTCGATAT CGATCAGGGG GAGATCTTCG GCCTGCTGGG ACCCAACGGC
GCCGGAAAGA CAACGACTCT TTCGATGCTC TCCACCATGC TCACCCCCAC ATCCGGTTCA
GCCACGATCA ACGGCATCGA TATCGAACGG GACCCGGACG GGGTCAGGAG AGCCATCGGT
ATCGTCTTCC AGGACCAGAG CCTCGATGAA GAACTGACCG CATGGGAGAA TATGGACTTC
CATGGCCGAC TCTATCGCAT CCCGGCAGAG ACCCGTCACC AGCGGATCAC CGAACTCCTC
ACGCTCGTCG AACTGAACGA TCGCAGGGAC GATATCGTCA AAACCTTCTC CGGGGGGATG
AGACGCCGGC TGGAGATCGC TCGCGGCCTC CTCCATCACC CTTCGGTCCT CTTCCTCGAC
GAACCGACCC TCGGCCTCGA CCCCCAGACC CGCAATCATC TCTGGCAGTA CATCGACACG
CTCGCCAGGG AGAAAGGGAT CACTATCATC CTCACGACCC ATTACATGGA GGAGGCGGAC
CGGTTATGTC ACCGGATTGC CATCATCGAT CATGGTAAGA TCATCGCCAT CGACACCCCG
GAGAATCTGA AGAACGGTCT CGGCGGGGAT CTGATCACCA TCAGGTCCCC CCAGCCGGCA
GCTGCAGTCG AAGCCCTCAA GCAACCCTGG GTGATTCGGG TGGAGACCCA CAACGATGAC
GTGGTCGTCA GTCTGAAGAA TGCCGAGCAG TTCGTCAGCA CGATCGTCAC GCTCCTCAAC
GAGAGGGAGG TGCCGATCAC CTCGATCGCG ATCCACAAGC CCACCCTCGA GGATGTCTTC
CTCTCCTTCA CCGGGAAGAC CATTCGGGAG CAGGAAGCAG ACCATAAGGA GCAGATGCGG
ACACACCAGA GAATGGGGAG GCACTGA
 
Protein sequence
MTVALHIQNL TRRFNDLVAV DNISFDIDQG EIFGLLGPNG AGKTTTLSML STMLTPTSGS 
ATINGIDIER DPDGVRRAIG IVFQDQSLDE ELTAWENMDF HGRLYRIPAE TRHQRITELL
TLVELNDRRD DIVKTFSGGM RRRLEIARGL LHHPSVLFLD EPTLGLDPQT RNHLWQYIDT
LAREKGITII LTTHYMEEAD RLCHRIAIID HGKIIAIDTP ENLKNGLGGD LITIRSPQPA
AAVEALKQPW VIRVETHNDD VVVSLKNAEQ FVSTIVTLLN EREVPITSIA IHKPTLEDVF
LSFTGKTIRE QEADHKEQMR THQRMGRH