| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2552 |
|---|
| Symbol | |
|---|
| ID | 7270679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2681043 |
|---|
| End bp | 2681840 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643571148 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002467547 |
|---|
| Protein GI | 219853115 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00146174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATA TTGATTATAT TAATAGAGAA ATTGATGAAC TAGAACGATT GGCCTGTAAA
ACTGAAGAAG CAGCAAGAAA ACTGCTGTAT GAAACTCCAT TATCACATAT TACCCATCCA
TATGGAGATT TTGGTGATCA ATCATATTAT ATCTGGCAAA GAGTTGACGA TGATCAAAAA
GAAAATCAAC GAATTGCAAT TCGAGATTAT GAAAGATATT ACTCCGTGGG GCTGCATTTT
ATCAAGGAAT TTCGTCCTGA AAAAGAGAGG GAATTCTCAG AATGCTATGA ATCTGGAGGA
CGTACGCCGT TTCAACCGGG AATTATGGAT TATCTCAAAT TCCGTCACTC TCAAGAGGCA
GAAAGTAAGG TAAAAATTAT TGATGAATTC GTTAATCGAT TTGAAATTCA AAGAAGTATC
TTATATTCAG TACCTTATGT TGCAAAAATA AGTGAGCATA AATTACGAGA TATAATATCT
GGGGATTATA TCGAAAGGGA AATTGAACAA TCCGAATATT TATACGAAAA AGGTTTTGAA
AGAGCAGCCG GAGCATTAGC GGGCGTTGCA TTAGAGCAAT ATCTCAGAAC ACAATGTGAT
AAAAATCAAA TCGATTACAA CAAGAAGGAA ACAATGGTTC CTTTGGTTCA AAAACTCTAT
GATGAAAATA AAATCGATCT TATCTTGAAG AAAAAAATTG AACATCTGGC GAGTATTCGA
AATTTCTGTG ATCATCCCTT TGAGGTCAAT AAAGGGCAAG TTAAGGAACT GATTGAAAAT
GTGAAAAAGA TTGTTTGA
|
|---|
| Protein sequence | MSDIDYINRE IDELERLACK TEEAARKLLY ETPLSHITHP YGDFGDQSYY IWQRVDDDQK
ENQRIAIRDY ERYYSVGLHF IKEFRPEKER EFSECYESGG RTPFQPGIMD YLKFRHSQEA
ESKVKIIDEF VNRFEIQRSI LYSVPYVAKI SEHKLRDIIS GDYIEREIEQ SEYLYEKGFE
RAAGALAGVA LEQYLRTQCD KNQIDYNKKE TMVPLVQKLY DENKIDLILK KKIEHLASIR
NFCDHPFEVN KGQVKELIEN VKKIV
|
|---|
| |