Gene Mpal_2551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2551 
Symbol 
ID7270678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2679234 
End bp2680757 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content38% 
IMG OID643571147 
ProductP4 family phage/plasmid primase 
Protein accessionYP_002467546 
Protein GI219853114 
COG category[R] General function prediction only 
COG ID[COG3378] Predicted ATPase 
TIGRFAM ID[TIGR01613] phage/plasmid primase, P4 family, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00685324 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTATA CTTGTAAGTA CTTTAATTTT ACTCCCTCAA ATTCCCCGAT TTTAAGGGAA 
TTATTCAAAA CCTATCAAGA GTATGCTGAG GAATATGAAA AGACAGTTGA ACAAGATGGC
TTTCAGGGAA GCATCGACCC GTATACGTAC GTGAATGGCT TAATTTCCAC TTGGGAAAAG
TCGTGGAAGG AAAATCCCTC CCGATTCACT TATCAACCGG ATCCAAACAA ATCAACAAAG
AAGCCAAATC TTGACACAAT TATGGATTAC GTTATCAAGC ATTTTGCTGC TATAACGTTT
AAAGATGTAA TTTACATTTA TGACCAGAAA ACAGGGACCT ATCGTCCAGA TGAAGGAGAA
ATTAATGGAT TAATTATGGA TCTTCTTCAT TCAGAGGGAT ATACGAATAA TAACAAGATT
GCCGAACTGT TTAGGGAAAT ACAGACTCGA ATAAAGGCGC GAAATATAAT TACTAAATAT
CCATTCAATC TGGTTGCTAA TCTGATCCCA TGTAAGAATG GTGTACTTGA TCCACTAACT
CAAACAATTG TTCCTCGTTC ACCTGCATAC GGCTTCACAT ATATGATAAA TGCTGAGTAT
CTTCCTGAAG TGGATTGCAT ATTTATTAAA AAATATCTCA GGACTTTGGT AGCACCAAAA
GATTATGAGA TGCTGCTTAA CTTAGGAGCC TCGTGTTTGA TCCGTGAATC TCAGAAGAAG
ATGTACCTCA TCTACAACAG GAGTGGAAAT AATGGAAAAA CAACACTTCT CAATCTTCTA
ACAGACATGC TTGGGAAAGA GAATACATCT TCATTATCCC TTCAAGATTT TGATAAAGGT
GGATTTCGGG TTGCAGAGAT CGATGGAAAG ATTGCAAATA TTTCTGGAGA TTTACCTACT
ACAAGAATCT CGGATACCTC AGTTATCAAG CAGTTAACAG GAGAAGATTT CATTATGATA
GAGCGAAAAT ATGGCCAGCC TTATGAAATC CAAAACCGAG CAATATTGAT CTTTGGTGCG
AATGAGCCCC CAGTATTCAA TGATACAACT GATGCATTTT ACTCCAGGAT GGTTATGATA
GAATTTCCAA ATCAATTCAA GGTAGACTTG GATTTTAATA AAAAGCTCAA AGAACCGGAA
AATTTAAGCG CACTGCTAAA GGTATTCGTG GATCATATCC CTACGCTCCT TAAGTCAGGG
ATAACCACAG ACACAGAAGC GATGAAGAAC CAATACCTAA GGGAGAGCGA TTCCGTATAT
CGCTTCTTTG AAGATAATTT AGTCAAAGAT CAATTTGGAG AAATCGATCT TGATCTAGTC
TATGACGTAT ACATAGATTA CTGCACAGTG AACAAAGTAA AAAAAGTAGG GAAAAAAGCC
TTCAGTGTAC GGATGTCAGA GCATTTCGAT GTCTCAACAA GACGCAGGGG TTCAACAGGC
GAACAGATCG CATATCTGAA AGGTGTCAAG TTTAAGTCTG CTAAACAACA GACATTTGAT
CAGATTGAGA TGACTGCGGC TTGA
 
Protein sequence
MIYTCKYFNF TPSNSPILRE LFKTYQEYAE EYEKTVEQDG FQGSIDPYTY VNGLISTWEK 
SWKENPSRFT YQPDPNKSTK KPNLDTIMDY VIKHFAAITF KDVIYIYDQK TGTYRPDEGE
INGLIMDLLH SEGYTNNNKI AELFREIQTR IKARNIITKY PFNLVANLIP CKNGVLDPLT
QTIVPRSPAY GFTYMINAEY LPEVDCIFIK KYLRTLVAPK DYEMLLNLGA SCLIRESQKK
MYLIYNRSGN NGKTTLLNLL TDMLGKENTS SLSLQDFDKG GFRVAEIDGK IANISGDLPT
TRISDTSVIK QLTGEDFIMI ERKYGQPYEI QNRAILIFGA NEPPVFNDTT DAFYSRMVMI
EFPNQFKVDL DFNKKLKEPE NLSALLKVFV DHIPTLLKSG ITTDTEAMKN QYLRESDSVY
RFFEDNLVKD QFGEIDLDLV YDVYIDYCTV NKVKKVGKKA FSVRMSEHFD VSTRRRGSTG
EQIAYLKGVK FKSAKQQTFD QIEMTAA