| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2525 |
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| Symbol | |
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| ID | 7271694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2657899 |
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| End bp | 2658603 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643571120 |
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| Product | putative RNA-associated protein |
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| Protein accession | YP_002467521 |
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| Protein GI | 219853089 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1500] Predicted exosome subunit |
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| TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.590746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCCAC TGGACAAAGC CGTGGTGGCC AGGCTGGAGA GCCATGCCGA ACGGTTTGAA
CTGCTCGTCG ACCCGGATGA GGCGAGCAGG TTCAAGCAGG GGGAGCTGAT CGAGATTGAG
GATATCGTCG CAGCGCTCAA TGTATTTGAG AATGCCGCCC ATGGGGACAG GGCCTCGGAC
GAGACCCTGA TGAAGGTCTT TGGAACGCTG GACTTTCCAA CGATCGCAAA GAGGATCATC
GAGAAGGGGG AGATCCACCT GACCTCCGAC CAGCGGAGGC ATATGATCGC AGACAAGCGC
AAACAGGTGG TGAACTTCAT TGCTCGCAAC GCCGTGAACC CGCAGACCGG GTACCCGCAT
CCGCCAACGC GGATCGAGAT GGCGATGGAG GAGGCCAGGG TGAACATCGA CCCGTTCAGA
CACCTTGACG ATCTGGTCAA GGATACGATG AAGGCCCTCC GCCCGTTGAT CCCGATCCGG
TTTGAGGAAC TCCGGCTCGC CGTGAAGATC CCGCCGGACT ATGCAGCCAA GTCCTTCCCT
GAGATTAGGG CAGGTGCTGT GATCGAGAAG GACGAATGGC AGCGGGACGG CTCATGGATC
TGCGTGGTCA GGATCCCGGC AGGCATCCAG AACGAGTTTT ATACGACCGT CAACCGGCTC
ACCAAGGGTG AGGGCGAGGT CAAGAAACTC AATCAGATAT ATTAA
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| Protein sequence | MIPLDKAVVA RLESHAERFE LLVDPDEASR FKQGELIEIE DIVAALNVFE NAAHGDRASD
ETLMKVFGTL DFPTIAKRII EKGEIHLTSD QRRHMIADKR KQVVNFIARN AVNPQTGYPH
PPTRIEMAME EARVNIDPFR HLDDLVKDTM KALRPLIPIR FEELRLAVKI PPDYAAKSFP
EIRAGAVIEK DEWQRDGSWI CVVRIPAGIQ NEFYTTVNRL TKGEGEVKKL NQIY
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