| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2511 |
|---|
| Symbol | |
|---|
| ID | 7271680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2648487 |
|---|
| End bp | 2649197 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643571106 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_002467507 |
|---|
| Protein GI | 219853075 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1709] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.122746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.67505 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCG GACTGCGTCA TCAACTCGCC GAAAAGATGG CTGGTGAGAT CACGCTTTCG
GACTCACCAG GGAAGGCCCT AAAGAAGTGG CGGATGAGTT TTGACATTCC GCAGGGTGTG
CTCGCAGAAC GGCTTGAGGT ATCCCCATCT GTGATCAGCG ACTATGAGAG CGGGCGAAGG
AAATCGCCGG GGACCGCAGT CGTCGGAAAG ATCGTCGACA CGATCCTCTC GATGGACGAG
GCCCAGGGAG GGCGGTATAT CCAGAAGTTC AGCACGATGC TCTATGCTGA CTTCGACGAC
GAGGTGATCT ATGATATGCA TGAGTACGCA GTCCAGGTCC CCCTTCGGGA GTTTGCAGAG
GTGATCAATG CGACCCACCT CTGCGGTTCG CTCGACCAGT CGCTGTACGG ATACACAGTG
ATCAACAGCC AGAATGCGAT TGTGCAGCTC TCCTCAAATG AGTTCAACCG ACTCTACGGT
TGGTCGACCG AGCGTGCAAT GATCTTCAAC GGGGTTTCAA ATGGCAAATC CCCGATGGTT
GCGATCAGAG TCACCTCGTT TAAACCACGA TGTGTGGTGC TACAGGGGAT CACGCCCGAG
GAGGTGCATC CAATTGTACC ACTGCTTGCA GACAAAGACC GGATCACGGT CCTCTGCACG
AGTATGGAGA TAGAGAAGAT TATTGCAGTA CTGAGAGGTC AGGAATGGTA G
|
|---|
| Protein sequence | MKSGLRHQLA EKMAGEITLS DSPGKALKKW RMSFDIPQGV LAERLEVSPS VISDYESGRR
KSPGTAVVGK IVDTILSMDE AQGGRYIQKF STMLYADFDD EVIYDMHEYA VQVPLREFAE
VINATHLCGS LDQSLYGYTV INSQNAIVQL SSNEFNRLYG WSTERAMIFN GVSNGKSPMV
AIRVTSFKPR CVVLQGITPE EVHPIVPLLA DKDRITVLCT SMEIEKIIAV LRGQEW
|
|---|
| |