Gene Mpal_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2500 
Symbol 
ID7271669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2638439 
End bp2638996 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content52% 
IMG OID643571095 
Producthypothetical protein 
Protein accessionYP_002467496 
Protein GI219853064 
COG category[S] Function unknown 
COG ID[COG4739] Uncharacterized protein containing a ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.120376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.416305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCAG AAACTGATGC AGTAAAAACC GTTGCCGGTC TTATGGCACT GGCAGCACGT 
ACCGCACCAA AAGCCGTAGG GCTTGATTCT CTTGCCATCG AGGTTGTCGG TAGGAAAGAA
CAGGAAATAA TAGCCGGTGA GATGATCCGG ATAGCTAAGG AAACTGGCAT GGACTTTTTC
CGGACCAATG GCGAGCAGAT TCTAGCCAGC GATGCGCTGG TCCTGATCGG CATTGCCGGG
CAGAACCCGA TTGGGCTGAA CTGCGGGGGA TGTGGTTATG CGACCTGCAA TGAGATGGCA
CAGGCATGTG AAAAAACAAA GCCCCAAAAG ACCGACTATG CCGGCCCGAA CTGCGTCTTC
AAGGTAACCG ATCTCGGTAT TGCAGTCGGT TCAGCAGCAA AAACTGCCAG CATCCACAAT
GCGGATAATC GTATCATGTA CAGCGCCGGT GTTGCTGCAA TGAAACTCGG GATTATCAAA
GGTTGTAGCA TTGTATACGG GATCCCGCTC AAGGCATCGG GGCAGAACAT CTATTTTACC
ACCGCAATCG AGCACTGA
 
Protein sequence
MSAETDAVKT VAGLMALAAR TAPKAVGLDS LAIEVVGRKE QEIIAGEMIR IAKETGMDFF 
RTNGEQILAS DALVLIGIAG QNPIGLNCGG CGYATCNEMA QACEKTKPQK TDYAGPNCVF
KVTDLGIAVG SAAKTASIHN ADNRIMYSAG VAAMKLGIIK GCSIVYGIPL KASGQNIYFT
TAIEH