Gene Mpal_2466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2466 
Symbol 
ID7271635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2606126 
End bp2607244 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content63% 
IMG OID643571064 
Producthypothetical protein 
Protein accessionYP_002467465 
Protein GI219853033 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC TCACATCACT ACCCGAGGCC GTCCGATCGA TTCTGGTGGA TGCGGTCCGC 
TGGTCCCGGG AGATCCCGGT ACCGGTATCC CAGAGTGTGG CGGTTGCGCT CGGCATGGCG
GTCCCCATCG CAGTCGGTGT GGCGATCGAT CAGATCGGCC TGGGCATGCT CGCATCGCTC
GGCGGACTTG CGGCGAGTGG TGCCGCCGGC ACCCTCCGTG AGCAGGGGAT CCTCCTCTGT
TCTGCGTTGG TGACCGGGTG TGCGGCGGTC CTCGTCGGCT CCACGATCGC CGGTCACGGC
TGGATGACCG GCGCAGCGAT CGTCCTGATC ACAACCATCG CAGCCCTGGT CGGCAGTCTC
GGCAGAACAT TCGCCCGGTC CACCACGGTC TTCACGATCT TCATGATCAT CGGCACCTCC
CTCGGGATTT CGGGAGCCCT TCCCCCTATC GACGTGACCC TCGTCTTCGC GGCTGGTGCC
GCCTGGACCG TGATCGTGTC GTTGTTGGCG TCGTCGCTGT TCCGGGCGCT CGGGAGGGAA
GGTCTCACTG CCGGAACCAC CGTCATCGAT CAGCAACCTG CACCGATCAC GCTGCGGCGA
CGGTTTCGCC GGTGGTTTCG TTCGCTCCAG CATCTGGCCG GATGGCAGTA TACCCTGCGG
ATCAGTCTCT GCATCCTGGT CTCCGAGATC ATCGCCGTGC TCTGGGATCA GCCGTGGTCG
TACTGGATCC CCCTGGTGGT GGTGATCATT CTTCAGCGGA ACATCGAGAC CACGCTCGCC
AGGGCATCGC AGCGTGCCCT CGGGACCTGC GCCGGGGTCA TCATCGGGAG TGTTCTTCTC
TCGAAATTCA CGCCGATTTG GTTTCTGATT CTGATGGTGG GTATCCTGGC AGCGGTACGC
CCGATCCTGA GAGTCCGCAA CTATACGCTC TATACCGTCG TGATGACACC GCTGATCATC
ATCCTGCTCG AGTTCGGATC TACTCTGTCA TCCGGGGTGC TGGCCTACCG GCTGGTTGAC
ACCGCGATCG GGTTCATCAT TGTGGTCGTC TTTGGCTACC TTCTCTGGCC GGTACTGCTG
GTGCGATCAC CGATGCCCGT CACCGAACCG GGATCCTGA
 
Protein sequence
MNALTSLPEA VRSILVDAVR WSREIPVPVS QSVAVALGMA VPIAVGVAID QIGLGMLASL 
GGLAASGAAG TLREQGILLC SALVTGCAAV LVGSTIAGHG WMTGAAIVLI TTIAALVGSL
GRTFARSTTV FTIFMIIGTS LGISGALPPI DVTLVFAAGA AWTVIVSLLA SSLFRALGRE
GLTAGTTVID QQPAPITLRR RFRRWFRSLQ HLAGWQYTLR ISLCILVSEI IAVLWDQPWS
YWIPLVVVII LQRNIETTLA RASQRALGTC AGVIIGSVLL SKFTPIWFLI LMVGILAAVR
PILRVRNYTL YTVVMTPLII ILLEFGSTLS SGVLAYRLVD TAIGFIIVVV FGYLLWPVLL
VRSPMPVTEP GS