| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2453 |
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| Symbol | |
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| ID | 7271366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2586484 |
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| End bp | 2588295 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643571052 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002467453 |
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| Protein GI | 219853021 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.704197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGTT CTGTTCTGGG GCGCGAAGGG TTCTGGAACG CTGTATTTCT CGCCACCACC
ATCGCACTCC TCCTGCTGAA CGGTGTTGGT CTCATCTATG GGATCACGAT CGTCCTCCCT
CACTTTCTAT ATATCCCGGT GGTGATCGGC GCATATCGGT TCCCTCGATG GGGGACTGCC
GCCGCCGGGT GTATCGGGGG AGTCTATCTG GTGATGGTCC TCCTGATCAC CGGCGGTTCG
CCTCCTCTCC TGAATGAGGC GCTGGTCCGC GTCGGTCTGC TGATCGTCAT CGGGTGGTTG
GTCGCCCTGC TCACCCGCCG GCTTGGTGAA CAGGAGGACC TCTACCGGGG TCTCTTCGAT
CATTCGGAGG GGGGGAGTCT CCTGATCGTC GTCACCGGGG CCAGGCGGGT TGTTGGGGAG
GTCAACTGGA AGGCCGCCTC CCTCGTTGGC AGGAAGCGCT CGGCACTTCG GGGCGGCCCC
CTCACCGCGT TCTGGGATCC CGGGGAAGAG TCTGCCTTCT TCTCCCGCCT CTCCCGGGGG
GGGGCGGTGT ACGAGACCGA GACAATCTTC TCCCTGCCCG ATGGCGCCCC TCTGATCGTC
CAGGTTTCCG CCGCCTCGCT CCGTGGGGGG AGGGTGATCC TCACCTTCTT TGACATTACG
GCCCGTGTTC ACGCCGAACA GGCCCTGAAG ACCGCTAACG ACAAGCTCAA CTTCCTCGCA
CGCATCTCGG CCGATCACCT GCAGCGGACC GTCGACGAGA TCAGGGCGAC GGTCGATGAG
GCGGCTGCAC ACGACGGCGG CGCTGGGTTC CAGGCGTACT TCGGGCGTAT CCGGGTTCTT
GCAGGGACCA TCTCCAGGCA ACTCGTTCTC ACTGAGTCCT ATAAGGATCT CGGAACCTCC
CCGCCAGTCT GGCAGAACGT CCAGAGGGCA CTTGAGTCTG TGCATCTGCC GGTGGATGCC
GGTACCGTCA GGGTCCGGTT CTGGGCCAAA CGGCTTGAAA TCTATGCCGA CCCCCTCCTC
GTCGACGTTC TCGCCCACCT CGTCAGGAAC CCGTTCCGGT TCGCCGGCTC GGTGACAGAG
ATCCTTGTCC GCTATCAGGA GACCGGTGAC GGACTTGCAC TCCTGGTGGA GGATGACGGT
CAAGGCATCC CGACCGCCGA GAAGAAACAG ATCTTCGAGT ACGATGCGGG GGAGCACGCC
GGGATTGGAC TCTTCATCTG CCGGCAGATC CTCGAGGTGA CCGGGATGAC CATCGAGGAG
ACCGGGATCG AGGGGCAGGG GGCACAGTTC GTAATCCATG TTCTGCCCGG CGGGTATCGG
ATCGAAGGGA GCGGTGATGA CGCCCCTGCG ACCCGGCTCC ACGGAGTTCT GGACGCCCCC
GGTCTTTCGG TGCGGGAACT CTCCTCTGCA GAGTTCCCGA TCGCTGAGGC GGTCTGGGTC
GAGTACCATC AGATGACTGG TGATCCCCGG ACGGACCGGG TCTTTGCGGC GTTCCAGGAT
GGTCAGGTGG TCTCTCTGGC CCGGTGTCGT CGTCATCCGG ACGGGCTCGA GGTGGATGGG
GTCTTCACGC TGATCGTTCA CCGGAGTCAT GGGTATGCAC ATGCCGTGGT GTCGGCCCTT
GTCGAGGCCT GCGGGCGTGA ACTTCTCTTT ATGTACGCGG TCCGGGACCT CGTCGGGTTC
TACGGCCGGT ATGGGTTTGT CCCGATCGAT GAACATCAAC TCCCACCCAC AATCCGCGAA
CGGTATGCAT GGGCCCAGGG GCAGATGGAG GGGGCGAACG TCTGCCCGAT GAGGCGGGAT
CCTTTGGGGT GA
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| Protein sequence | MNRSVLGREG FWNAVFLATT IALLLLNGVG LIYGITIVLP HFLYIPVVIG AYRFPRWGTA
AAGCIGGVYL VMVLLITGGS PPLLNEALVR VGLLIVIGWL VALLTRRLGE QEDLYRGLFD
HSEGGSLLIV VTGARRVVGE VNWKAASLVG RKRSALRGGP LTAFWDPGEE SAFFSRLSRG
GAVYETETIF SLPDGAPLIV QVSAASLRGG RVILTFFDIT ARVHAEQALK TANDKLNFLA
RISADHLQRT VDEIRATVDE AAAHDGGAGF QAYFGRIRVL AGTISRQLVL TESYKDLGTS
PPVWQNVQRA LESVHLPVDA GTVRVRFWAK RLEIYADPLL VDVLAHLVRN PFRFAGSVTE
ILVRYQETGD GLALLVEDDG QGIPTAEKKQ IFEYDAGEHA GIGLFICRQI LEVTGMTIEE
TGIEGQGAQF VIHVLPGGYR IEGSGDDAPA TRLHGVLDAP GLSVRELSSA EFPIAEAVWV
EYHQMTGDPR TDRVFAAFQD GQVVSLARCR RHPDGLEVDG VFTLIVHRSH GYAHAVVSAL
VEACGRELLF MYAVRDLVGF YGRYGFVPID EHQLPPTIRE RYAWAQGQME GANVCPMRRD
PLG
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