Gene Mpal_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2447 
Symbol 
ID7271360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2581021 
End bp2582235 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content57% 
IMG OID643571046 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_002467447 
Protein GI219853015 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGG TGCCGGAGCC CGGGGATAAG AACTATATTT CAGAAGGTTG TGACGACAGT 
CTCCTCCATA TCGACCAGGA GAGGAAGGAA CTGTTGCAGA GCCTGGCACA GGAGCATGGA
ACCCCGATCT TTGTCATCGA TCATGAGAAG ATCCGGCAGA ACTACCGGGA GTTTCGTGAA
CATCTGCCCG ATGTCCAGGT GTACTTTGCG GTCAAGGCCA ACTCGAACCC TGAGATCGTG
AAGACGCTCT TCGATATGGG GTGCAGTTTC GACGTCGCCT CCATGCCTGA GTTCATGGTC
GTCTACGAGA ACATCAAGGA CTTGCCAGAT AAAGAGCGGC AGGAATGGAT CTGGGACAAG
ATCATCTATG CCAATACCAT CAAGCCGATC GAGACCATCG AGGCCCTCAA CCAGTACAAG
CCGCTTGTCA CTTTCGATAA CAGCGAGGAA CTGAAGAAGA TCCGGACCTA TGCCCCCCAT
GCGGGGCTGG TCTTACGGAT CCGGGTTCCC AATACCGGAT CGATGGTTGA ACTCTCCTCC
AAGTTCGGGG CTGAACCGGG GGAAGCCGTC GACCTGATCT CCGAAGCGTT TGCGATGGGA
CTGGTCACCG AGGGGCTCAG TTTCCATGTC GGCAGCCAGT GCACCAACTT TGATAACTAT
GTCCAGGCCC TGGAACTCTC GGCTAATATC ATCGAGGAGG TCGAGACCCG AACCGGCCAG
AAGATCCGAA TCCTCGACAT TGGTGGCGGT TTTCCGGTTC GGTACCACCC GGAGGTGAAG
TCCTTTCACC TCCTTGCCAG GAGGCTGAAC ACCGAGATCG AGCGGCTCTT CCCTCCTGAC
ATGCAGATCC TGGCCGAACC CGGGCGGTTC CTGGTGGCCA ACGCCTGCAC GCTCGTCTCC
AAGGTGATCG GGAAGGCCTT CCGCGACGGA AAGCCCGGCT ATTACATCAA TGATGGGGTC
TACCACACCT ACTCCGGGCA GGTCTTCGAC CACAACACCT ACCCGGTGCT GGCCTTTAAG
GAGGGAGAAA CTCAGATCTC AGCGGTCTTC GGCCCGACCT GCGATGCCTT CGACACGATC
ACGCTCAGCG CCGAACTGCC GGATCTTGAG ATCAACGACC TCGTCTACTC AGAGAATATC
GGTGCCTACT CGATCGCCTC GTCCACCTAC TTCAACGGCT TTCCGCCGGC GACAGTGCTC
CATATCAACC TCTGA
 
Protein sequence
MTTVPEPGDK NYISEGCDDS LLHIDQERKE LLQSLAQEHG TPIFVIDHEK IRQNYREFRE 
HLPDVQVYFA VKANSNPEIV KTLFDMGCSF DVASMPEFMV VYENIKDLPD KERQEWIWDK
IIYANTIKPI ETIEALNQYK PLVTFDNSEE LKKIRTYAPH AGLVLRIRVP NTGSMVELSS
KFGAEPGEAV DLISEAFAMG LVTEGLSFHV GSQCTNFDNY VQALELSANI IEEVETRTGQ
KIRILDIGGG FPVRYHPEVK SFHLLARRLN TEIERLFPPD MQILAEPGRF LVANACTLVS
KVIGKAFRDG KPGYYINDGV YHTYSGQVFD HNTYPVLAFK EGETQISAVF GPTCDAFDTI
TLSAELPDLE INDLVYSENI GAYSIASSTY FNGFPPATVL HINL